AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi6g01917 ATGGCAGTAGCTAAGCTGCTTCTTCCATCTCTAAACCCTCCTTTCAAATTCAAACTCACCGTACAATCACCCTCTCTTCAACAACAATCATGGAACCCAAAACCAAACAAGCCACGTCATCATCATTGTCCCGCAATTTCCGCATCACTTCACGAAACTGCAACAATTGCAATTCAAAATCCTCTGTTTCTACTTGCAGACGCGGCTGTCGGTTATTCGAATGCCAGCTATTACACTTCTCTTGGATTGTTTGTTATCTCTGTACCTGGAGTTTGGTCACTCATTAAACGTTCTGTTAAATCTAAGGTGGTAAAGAAGACATTTGTGGAGGAGTTAATTGAAGGAAAAAATAAACCGCCTAATCAGGTTGCTGGAGAAATTTTGTCATTTTTTACTCGGAATAACTTCTCGGTGGTGGATAAAGGAGAGACGATAACGTTTGAAGGTGTGATGATTCCGAGCAGAGGGCAAGCGGCACTCCTGACGTTCTGCACCTTTATCAGTCTGGCTAGTGTTGCGCTAGTGCTTACGATCACTGTTCCAGACGTTGGAAACAATTGGTTTGCCCTCACTGTTTTGAGTCCATTGGCTGGGGCGTATTACTGGAAACGAGCATCGAGAAAAGAGCAGATAAAGGTGAAAATGATGGTGGCGGAAGATGGCAACCTGTCGGAGATAATTGTTCAAGGAGACGATCAGCAGGTTGAGCAGATGAGAAAGGACTTGCAGTTAAACGAGAAAGGCATGGTTTACGTGAAAGGCATCTTCGAGAGATGA 777 44.02 MAVAKLLLPSLNPPFKFKLTVQSPSLQQQSWNPKPNKPRHHHCPAISASLHETATIAIQNPLFLLADAAVGYSNASYYTSLGLFVISVPGVWSLIKRSVKSKVVKKTFVEELIEGKNKPPNQVAGEILSFFTRNNFSVVDKGETITFEGVMIPSRGQAALLTFCTFISLASVALVLTITVPDVGNNWFALTVLSPLAGAYYWKRASRKEQIKVKMMVAEDGNLSEIIVQGDDQQVEQMRKDLQLNEKGMVYVKGIFER 258
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi6g01917 258 Pfam Cofactor assembly of complex C subunit B 76 244 IPR021919 -
Lomi6g01917 258 PANTHER - 5 258 IPR021919 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi6g01917 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
326397 Lomi7g01691 Lomi6g01917
330775 Lomi6g01917 Lomi7g01691
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr6:27073935 Lomi7g01691 Lomi-Chr7:27243720 wgd