Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lomi6g01921 | ATGGAAGATACCTTCAAAGTTCGAGTTGACAAAACTTTCGGATCTCTAGAATCTTTTTCATCTTCATCTTCCACAATCAAATCACAACAATCGTCATCTTTGAACTCTTTGTGGTGTCTTACAGACGAAGAAATCGAAAGAAATAAATGGATACAAGATAAAATCGAACAACCTCACGACGATATCGATGAGCAAATTCACCGTCTTAAAAATCCTAAACCCTATTCCCCCTTTCTTCAAGGCCTTCTTGCTCAACCCTCAACTTCCGATCAAAACCTAGAATCTGACATTCAAGAGCTTGATGAAGATGATGATGAAGATGATAATGATGGTGAAAACCGGAAACCGGAACTGACTAAACCGGATGATCATGATAATGAAGAATGGAATATTCGAACTTCAGTTGGCATGGATTGCACTCTCGATAACGAGGAAGAGGAAGATGCTTATGACAAGGTGGCTGTAGGCAAGGGAGAGTCTGTAGATCGTTTTTACTTGAAAAGTGTTAATGATTATGAAGTTGATATGGATTCCATCAATGAGCGTCCCAACTCATTCTCTGATGTGATTAGGGATCCACGTGCAAATCACATGGCTGCAAAACTCAGGCTTAAAGAAGACGATGAATCTGCTAGAAAGTTAGGTCTGCAGGTTTCTAAGAATAATGTTCAGAAGTCAACTCAAACTTCTATAGAATTGAAGGAACAGTTAGTGACTAATGAACCTCAAGGAATGAAAGTAGTACCCTTTTTCCCTCAAAGTTCGTCTAGTCTTCCGGATCATGTACGCAATCCTTCAAAGTACACACATTACACCTTTGATTCAAAGGACGATGTGGATGAAGAAACAAATCAAAAAGCTTATATGGACTTCTTTAATTCGATGAAGGGGTCTGATACGATGGACACACAAGATGTATCAACTGATTCTTTAAAATCAATTACATTCACTCCGAAAAAGAAGTCAGGTGATGTCACAATGAAGAACAGTAAGGTAGATGGATATGAAGACAAGAAAGTTGTTCCCATTAGTATTGCTGATAGTGAGGAGGTATGCATGATGGATGAAGACGAGCCTGAAATCTCCACAAATAAAGGTAGCGGCTTGCAGAAAGGTGGTCGCAAGTATCGAACAAAGGGTGGTATCCATGATGAATAA | 1158 | 39.12 | MEDTFKVRVDKTFGSLESFSSSSSTIKSQQSSSLNSLWCLTDEEIERNKWIQDKIEQPHDDIDEQIHRLKNPKPYSPFLQGLLAQPSTSDQNLESDIQELDEDDDEDDNDGENRKPELTKPDDHDNEEWNIRTSVGMDCTLDNEEEEDAYDKVAVGKGESVDRFYLKSVNDYEVDMDSINERPNSFSDVIRDPRANHMAAKLRLKEDDESARKLGLQVSKNNVQKSTQTSIELKEQLVTNEPQGMKVVPFFPQSSSSLPDHVRNPSKYTHYTFDSKDDVDEETNQKAYMDFFNSMKGSDTMDTQDVSTDSLKSITFTPKKKSGDVTMKNSKVDGYEDKKVVPISIADSEEVCMMDEDEPEISTNKGSGLQKGGRKYRTKGGIHDE | 385 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lomi6g01921 | 385 | MobiDBLite | consensus disorder prediction | 95 | 111 | - | - | |
| Lomi6g01921 | 385 | MobiDBLite | consensus disorder prediction | 112 | 131 | - | - | |
| Lomi6g01921 | 385 | MobiDBLite | consensus disorder prediction | 68 | 134 | - | - | |
| Lomi6g01921 | 385 | Pfam | Tumour suppressing sub-chromosomal transferable candidate 4 | 249 | 310 | IPR029338 | - | |
| Lomi6g01921 | 385 | PANTHER | TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 | 1 | 381 | IPR029338 | - | |
| Lomi6g01921 | 385 | MobiDBLite | consensus disorder prediction | 354 | 385 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lomi6g01921 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lomi | Lomi-Chr10:31593784 | Lomi6g01921 | Lomi-Chr6:27125869 | dispersed | |
| Lomi | Lomi-Chr6:27125869 | Lomi8g02355 | Lomi-Chr8:33072322 | wgd |