Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi6g01937	ATGGGGAGTGCATTCAATTCACAAATTTTGGCGGAGAAGCTGGCCAAGCTCAATAGTTCACAGCAGAGTATTGAGACTCTGTCACACTGGTGTATTTTTCATATGAATAACGCAAAACAAGTGGTTGAAATATGGGCTAGGCAATTCCACTGTTCCCCACGCGATCAACGTCTAGCTTTTCTCTATCTTGCAAATGATATATTGCAGAATAGTAGGCGAAAGGGTTCGGAGTTTGTTGATGAATTCTGGAAGGTTCTTTCAGATGCACTTCATGATGTAATTGATAGCACGGATGAATCTGGAAGAAAGGCTGCATTACGCTTGGTCAATATTTGGGAAGAAAGAAAAGTTTTTGGCTCTCAAGGCGAGATTCTTAAGAAAGAACTTGTTGGAAGGCATGTAGAAACAAGCAACAGGAATGAGAAGCATTCAGGGTTAAAATTGCAGTCTGCTGGAAATGCATTGGACAAGATAGTTTCAGGATATCAAGCTATATATGGTGGTCAACATGATGAAGATGTTATGATCAACAAATGCAAAAACACTATTAGCTGCATTGAAAAAGTGGAGAAGAAAATTGGCGGGGATATTAAATCTGCACAGGTGAATGGATTGGGTATCATGGAAGAGCTCAAGGGGCATCATGCTACATTAAGGGATTGTATAGAGCAACTTTCAGCTGCAGAATCATCAATAGTTAATCTTGTTTGTTATCTACGGGAGGCTCTTCAAGAGCAGGAAGTGAAGCTGGATCAAGGTCGTAATGAACTTAAGGCAGCAAATACCCAATCAGAAAAGGCTGATACTTTATGCAGGCAATTGGTGAATCCTGGTAACACCATTAACACCCCGAAAGCTCACAGTTACATTCCTGGAAGCGGAGACCAATCTGCACCAGCAATGTACACACGACTAGTTCCTATTTCCAATCAACCCAATGGAACTACTAAATCCGCTGCAGCTGTAGTGGCAGAAAAGCTCACTGCATCCACATCTTCAGCTGAAATGCTATCATATGTCCTCTCATCACTGGCGTCCGAGGGCGTTATAGGCAACAATACAGTTAATCAATCATCCTCAAATATTTCCTGCCCTCCTGAAAAGAGAGCCAAGATTGAGAATGATCAAAATCCTCAACCACCAGAGTCATCCCATGATCAACAACCATCAATGCCCCCGATGCAAGCATACTCAGTGCCCCCTTTCGTGCAAACTGCTGGGACAATACCATATGGCTACATCACAAATCAACAACTACCAGCGCCTTTCGTGGGCCATCCCAATGTCCTCCCACCAATCAATAGAGGTGGTTCATATGCACCGACAACGCCACCAACTGCTTATCAGAGTTATCAAATGGAAGGTGGGTTCAGTAGCCAACCAATGGCCCCTACGTCTAGACAGTGA	1407	43.28	MGSAFNSQILAEKLAKLNSSQQSIETLSHWCIFHMNNAKQVVEIWARQFHCSPRDQRLAFLYLANDILQNSRRKGSEFVDEFWKVLSDALHDVIDSTDESGRKAALRLVNIWEERKVFGSQGEILKKELVGRHVETSNRNEKHSGLKLQSAGNALDKIVSGYQAIYGGQHDEDVMINKCKNTISCIEKVEKKIGGDIKSAQVNGLGIMEELKGHHATLRDCIEQLSAAESSIVNLVCYLREALQEQEVKLDQGRNELKAANTQSEKADTLCRQLVNPGNTINTPKAHSYIPGSGDQSAPAMYTRLVPISNQPNGTTKSAAAVVAEKLTASTSSAEMLSYVLSSLASEGVIGNNTVNQSSSNISCPPEKRAKIENDQNPQPPESSHDQQPSMPPMQAYSVPPFVQTAGTIPYGYITNQQLPAPFVGHPNVLPPINRGGSYAPTTPPTAYQSYQMEGGFSSQPMAPTSRQ	468

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi6g01937	468	CDD	CID-RPRD-like	8	129	-	-
	Lomi6g01937	468	Coils	Coil	243	263	-	-
	Lomi6g01937	468	SMART	558neu5	9	130	IPR006569	-
	Lomi6g01937	468	ProSiteProfiles	CID domain profile.	2	134	IPR006569	-
	Lomi6g01937	468	MobiDBLite	consensus disorder prediction	352	398	-	-
	Lomi6g01937	468	MobiDBLite	consensus disorder prediction	435	468	-	-
	Lomi6g01937	468	Pfam	CID domain	9	120	IPR006569	-
	Lomi6g01937	468	MobiDBLite	consensus disorder prediction	376	393	-	-
	Lomi6g01937	468	FunFam	ENTH-VHS family protein isoform 1	2	130	-	-
	Lomi6g01937	468	SUPERFAMILY	ENTH-VHS domain	9	117	IPR008942	-
	Lomi6g01937	468	MobiDBLite	consensus disorder prediction	439	468	-	-
	Lomi6g01937	468	Gene3D	-	2	130	IPR008942	-
	Lomi6g01937	468	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	3	455	-	GO:0000993(PANTHER)\|GO:0031124(PANTHER)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi6g01937	K15559	regulator of Ty1 transposition protein 103

Event-related genes

Select	Gene_1	Gene_2	Event_name
	117071	Lomi10g00787	Lomi6g01937
	124484	Lomi6g01937	Lomi8g00860
	326412	Lomi7g01710	Lomi6g01937
	330790	Lomi6g01937	Lomi7g01710

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr6:27301539	Lomi7g01131	Lomi-Chr7:14748562	dispersed
	Lomi	Lomi-Chr10:7123084	Lomi6g01937	Lomi-Chr6:27301539	wgd
	Lomi	Lomi-Chr6:27301539	Lomi7g01710	Lomi-Chr7:27495613	wgd
	Lomi	Lomi-Chr6:27301539	Lomi8g00860	Lomi-Chr8:7070984	wgd