Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lomi7g01710	ATGGCGAGTGCATTCAATTCACAAATTTTGGTGGAGAAGCTGGCCAAGCTCAATAGTTCACAGCAGAGTATTGAGACTCTGTCACATTGGTGTATTTTTCATATGAATAATGCAAAACAAGTGGTTGAAACATGGGCTAGGCAATTCCACTGTTCGCCTCGTGATCAACGTCTAGCTTTTCTGTATCTTGCAAATGATATACTGCAGAATAGTAGGCGAAAGGGTTCGGAGTTTGTTGATGAATTCTGGAAAGTTCTTTCAGATGCACTTCATGATGTAATTGATAATACGGATGAATCTGGAAGAAAGGCTGTGTTACGCTTGGTAAATATTTGGGAAGAAAGAAAAGTTTTCGGCTCTCAGGGTGAGATTCTCAAAAAAGAATTTGTTGGAAGACATGTAGAAACGAGTAACAGGAATGAGAAGCATTCAGGGTTAAAGTTGCAGCAGTCTGCTGGAAATGCACTGGACAAACTAGTTTCCGGATATCAAGCTATATATGGTGGTCAACACGATGAAGATGTTATGATCAACAAATGCAAAAACACTATTAGCTGCATTGAAAAAGTGGAGAAGGAAATTGGCGGGGATATTAAATCTGCACAAGTGAATGGATCGGGTATCATGGAAGAGCTCAAGGGGCATCATGCTACATTAAGGGATTGTATTGAGCAACTTTCTTCTGCAGAATCATCAAGAATTAATCTTGTTTATTACCTACGGGAGGCTCTTCAAGAGCAGGAAGTGAAGCTGGATCAAGTCCGTGATGAACTTAAGGCAGCACATAACCAATCAGAAAAGGCTGATACTTTATGCAGACAATTGGTAAATCCTGGTGGCACCATCAATACCTCCAAAGCACATAATTACGTTCCTAGAACTGGAGACCAATCTGCACCAGCAATGTACACAAGACTAGTTCCTATTTCCATTCAACCCAATGAAACTACTAAATCGGCTGCAGCTGCAGTGGCAGCAAAGCTCACTGCATCCACATCTTCAGCTGAAATGCTATCGTATGTCCTCTCATCACTAGCATCTGAGGGCGTTATTGGCAACAATTCAGTTAAAGAATCGTCCTCAAATATTTCCTACCCTCCCGAAAAAAGAGCCAAGATTGAGAATGATCAAAATCCTCAACCACCAGAGTCATCAAATGATCAACAACCACCGACGCCCCCAATGCAAGGATACCTAGTATCCCCTTTCATGCAGACTGCTGGAACAATACCATATGGCTATATCACAAACCAACAACCACCAGCGCCTTTCGTGGGCCATCCCAATGTCTGCCCGCCAATCAACAGTGATGGTTCGTATGCACCAGCATCGCTGCCAATTGTTTATCAGGGTTATCAAATGGTCTCGAGTCAACCAATGGCACCTACGTCTAGACAGTAA	1401	42.47	MASAFNSQILVEKLAKLNSSQQSIETLSHWCIFHMNNAKQVVETWARQFHCSPRDQRLAFLYLANDILQNSRRKGSEFVDEFWKVLSDALHDVIDNTDESGRKAVLRLVNIWEERKVFGSQGEILKKEFVGRHVETSNRNEKHSGLKLQQSAGNALDKLVSGYQAIYGGQHDEDVMINKCKNTISCIEKVEKEIGGDIKSAQVNGSGIMEELKGHHATLRDCIEQLSSAESSRINLVYYLREALQEQEVKLDQVRDELKAAHNQSEKADTLCRQLVNPGGTINTSKAHNYVPRTGDQSAPAMYTRLVPISIQPNETTKSAAAAVAAKLTASTSSAEMLSYVLSSLASEGVIGNNSVKESSSNISYPPEKRAKIENDQNPQPPESSNDQQPPTPPMQGYLVSPFMQTAGTIPYGYITNQQPPAPFVGHPNVCPPINSDGSYAPASLPIVYQGYQMVSSQPMAPTSRQ	466

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lomi7g01710	466	Coils	Coil	241	271	-	-
	Lomi7g01710	466	MobiDBLite	consensus disorder prediction	353	399	-	-
	Lomi7g01710	466	SMART	558neu5	9	130	IPR006569	-
	Lomi7g01710	466	ProSiteProfiles	CID domain profile.	2	141	IPR006569	-
	Lomi7g01710	466	FunFam	ENTH-VHS family protein isoform 1	2	130	-	-
	Lomi7g01710	466	Pfam	CID domain	9	120	IPR006569	-
	Lomi7g01710	466	SUPERFAMILY	ENTH-VHS domain	11	117	IPR008942	-
	Lomi7g01710	466	CDD	CID-RPRD-like	8	120	-	-
	Lomi7g01710	466	PANTHER	CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN	3	461	-	GO:0000993(PANTHER)\|GO:0031124(PANTHER)
	Lomi7g01710	466	Gene3D	-	2	129	IPR008942	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lomi7g01710	K15559	regulator of Ty1 transposition protein 103

Event-related genes

Select	Gene_1	Gene_2	Event_name
	117072	Lomi10g00787	Lomi7g01710
	124678	Lomi7g01710	Lomi8g00860
	326412	Lomi7g01710	Lomi6g01937
	330790	Lomi6g01937	Lomi7g01710

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lomi	Lomi-Chr7:14748562	Lomi7g01710	Lomi-Chr7:27495613	dispersed
	Lomi	Lomi-Chr10:7123084	Lomi7g01710	Lomi-Chr7:27495613	wgd
	Lomi	Lomi-Chr6:27301539	Lomi7g01710	Lomi-Chr7:27495613	wgd
	Lomi	Lomi-Chr7:27495613	Lomi8g00860	Lomi-Chr8:7070984	wgd