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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi7g01712 ATGGAATCATCCTCACTTTTCATTGTCTTTTCGATGCTAATACCAATCTCAATCTCTTTGCAAGTTGATGCTTCAAAACACCCGAATCCCCGTATCTCGGTCGTTGGTGTTGTCTACTGTGACGCCTGTTCCACCAACTCTTTCTCCACCCACAGCTACTTCTTACCAGGGGCAGAGGTAAGAATAGATTGCAAGTTTAAAGTAGCATCTCCGAGAACTGAAGAGCAGATATCATTTTCGGTAAACAGGACTACCAACAGATATGGAGTGTACAAGCTGGATATACCTTCTGTCGATGGGATTAATTGTGCAAAAGAAGCAGAATTTCTCAACAACTGTAGAGCTACCTTGATTAGTAGCACTTCTCCTGCATGCAATGTTCCTGCCTTCGTAACCACTTCTAATGAATTCTCTGTTAAATCAAAACAAGCTAACCTTTGTATCTACAGTCTTTATGCTTTGAGTTTTCGACCTTCCAAGAAAGATCTTGCACTTTGTGGGAAGTAG 507 41.42 MESSSLFIVFSMLIPISISLQVDASKHPNPRISVVGVVYCDACSTNSFSTHSYFLPGAEVRIDCKFKVASPRTEEQISFSVNRTTNRYGVYKLDIPSVDGINCAKEAEFLNNCRATLISSTSPACNVPAFVTTSNEFSVKSKQANLCIYSLYALSFRPSKKDLALCGK 168
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi7g01712 168 Pfam Pollen protein Ole e 1 like 34 132 - -
Lomi7g01712 168 PANTHER OS09G0508200 PROTEIN 2 168 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi7g01712 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
326414 Lomi7g01712 Lomi6g01939
330792 Lomi6g01939 Lomi7g01712
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr7:27539372 Lomi8g02370 Lomi-Chr8:33217808 dispersed
Lomi Lomi-Chr9:14355812 Lomi7g01712 Lomi-Chr7:27539372 transposed
Lomi Lomi-Chr10:31760937 Lomi7g01712 Lomi-Chr7:27539372 wgd
Lomi Lomi-Chr6:27337964 Lomi7g01712 Lomi-Chr7:27539372 wgd