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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi7g01723 ATGGGTGCTTGTGTTTCACATCATAATAATAATAATAATAAAGGTTCTTCAATGAAGGTACAACAAGTGTCTCTTGATACTACTAATTATAATAAAGTTGATCATCAAGAAGTGGTGTCTGGTTCTACTACTTCTACCAACGGGAAACTTATTTCAGTAGTCATGGATGGTCATGTTGCTGTTAAACCTCAACTCCCTCCTTCTCAGTCACGATCTACGTTTTCCGATTATGGTAGTAAGGAGGAGACCTTTTTTGATTCCCAAGCATGGTTAGAGTCAGACTGTGAAGATGATTTTATGAGCGTTAATGGTGAATTTACTCCATCAAGAGGCAGTACACCGGTGCACCCTAGCTTGATTCTAGGTTCAAAAACTCACGCATCTCCAACTCCAACCGAGAAAAAGAAGAGACTTTTGGATCTTTTTAAAGAAAGCTTAAGAAACAACAATTTGGAAGTTGTTGAACCATCCAAGAAAGATGATGAAATGGGCTCTAACAAAGATGGTTTGAAACCGAAGAGTCAGAGGCATGTTGGTTCAATGCAAGGTTGCTTTTCGACTTTGCTTTCTGTACGTAGCACTGGCAGGCAAAAGAAGAGAGGGCCAATCTCGAGCCCAGTAGTTGGCTCATAG 633 40.13 MGACVSHHNNNNNKGSSMKVQQVSLDTTNYNKVDHQEVVSGSTTSTNGKLISVVMDGHVAVKPQLPPSQSRSTFSDYGSKEETFFDSQAWLESDCEDDFMSVNGEFTPSRGSTPVHPSLILGSKTHASPTPTEKKKRLLDLFKESLRNNNLEVVEPSKKDDEMGSNKDGLKPKSQRHVGSMQGCFSTLLSVRSTGRQKKRGPISSPVVGS 210
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi7g01723 210 MobiDBLite consensus disorder prediction 106 133 - -
Lomi7g01723 210 MobiDBLite consensus disorder prediction 150 210 - -
Lomi7g01723 210 MobiDBLite consensus disorder prediction 106 128 - -
Lomi7g01723 210 MobiDBLite consensus disorder prediction 153 174 - -
Lomi7g01723 210 MobiDBLite consensus disorder prediction 179 200 - -
Lomi7g01723 210 PANTHER OS01G0920100 PROTEIN 1 200 IPR038947 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi7g01723 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
117075 Lomi10g00805 Lomi7g01723
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr12:19368612 Lomi7g01723 Lomi-Chr7:27766278 dispersed
Lomi Lomi-Chr7:27766278 Lomi9g00808 Lomi-Chr9:15496217 dispersed
Lomi Lomi-Chr10:7287095 Lomi7g01723 Lomi-Chr7:27766278 wgd
Lomi Lomi-Chr6:27513372 Lomi7g01723 Lomi-Chr7:27766278 wgd