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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lomi7g01726 ATGGTAGTGGGAATGAAGGCGAAATACAAAAAGAACACATGTGTCCAACTTGATTGTGTTATCAATGTTGTAGAGATTAAGCCATGGCCTCCATCTAAGTCATTAATATCACTTCGATCTGCATTGATACAATGGGAACATGGTGACAAGAATTCAGGGTCTACTAAACCAGTTGCTCCTTCATATGTTTCCGGTTTTGGTGTCGGTGATGGTAAAATAGAGTTTAACGAATCTTTTAGGCTACATGTGACATTATCTAGGGAGCGTGAAGAACTGTATAGAGTTTAA 288 38.54 MVVGMKAKYKKNTCVQLDCVINVVEIKPWPPSKSLISLRSALIQWEHGDKNSGSTKPVAPSYVSGFGVGDGKIEFNESFRLHVTLSREREELYRV 95
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lomi7g01726 95 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 15 88 IPR021827 GO:0005643(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lomi7g01726 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lomi Lomi-Chr7:27809888 Lomi9g00812 Lomi-Chr9:15628447 dispersed
Lomi Lomi-Chr7:27809888 Lomi6g01949 Lomi-Chr6:27488813 transposed