Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa3g03599 | ATGGAATCGCAAAACGACTTCGATCGGCTTCTCTTTTTTGAGCATGCTCGCCGGAGTGCCGAAGTTACTTATGCAAAAAATCCTCTCGATACAGAGAATCTAACCAGATGGGGAGGGTCGTTGCTTGAATTGTCGACCTTCCAGAGTGTTCAGGAATCAAAAGTCATGATTAAAGATGCTATATCTAAATTGGATGAAGCATTATCGATTGATCCAAGGAAACATGATGCGTTGTGGTATATGGGCAATGCACAAACTTCTTATGCTTTTCTTACTCCTGATAAAGATGAAGCGAAAAGCTATTTTGATTCAGCTTACACTTACTTTCAGAAGGCTGTTGATGAGGATCCAGGGAATGAACTTTACCTCAAATCATTTGAAGTAGCTACAAAGGTATGTCCTGTTCATGTTTCTCCATTATCTCCTCTAGGTCAAAATTTCACATTTTTACACCAGTGA | 459 | 39.65 | MESQNDFDRLLFFEHARRSAEVTYAKNPLDTENLTRWGGSLLELSTFQSVQESKVMIKDAISKLDEALSIDPRKHDALWYMGNAQTSYAFLTPDKDEAKSYFDSAYTYFQKAVDEDPGNELYLKSFEVATKVCPVHVSPLSPLGQNFTFLHQ | 152 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa3g03599 | 152 | Pfam | Plant specific mitochondrial import receptor subunit TOM20 | 7 | 137 | - | - | |
| Lssa3g03599 | 152 | PANTHER | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED | 1 | 136 | IPR010547 | GO:0005742(InterPro)|GO:0045040(InterPro) | |
| Lssa3g03599 | 152 | Gene3D | Tetratricopeptide repeat domain | 1 | 151 | IPR011990 | GO:0005515(InterPro) | |
| Lssa3g03599 | 152 | SUPERFAMILY | TPR-like | 13 | 124 | IPR011990 | GO:0005515(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa3g03599 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 125877 | Lssa2g03025 | Lssa3g03599 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr3:208933019 | Lssa4g00113 | Lssa-Chr4:4272657 | dispersed | |
| Lssa | Lssa-Chr2:187856192 | Lssa3g03599 | Lssa-Chr3:208933019 | transposed | |
| Lssa | Lssa-Chr3:42278689 | Lssa3g03599 | Lssa-Chr3:208933019 | wgd |