Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa3g03632 | ATGCCAGAGGAAGATCTTTTAGAAGTAAAGTTTCGATTGTTTGATGGATCTGACATTGGTCCATTTCGGTATTCTCCAGCTTCCACGATTTCCCTTCTGAAAGAGAGAATTGTCGCTGAATGGCCCAAAGATAAAAAAGGTGGACCCAAATCAGCAAATGACATCAAATTGATAAATGCTGGTAAAATTTTGGAAAACAATAAGACTGTTGGCCAGTGTAGAACACCATTTGGAGATCTACCAATTACAATGCATGCTCTTGTACAAGTTTCTTTAACCAAGACAAAAACAGTTCTGTTAACTGAGAATGATATTTGTTCTGTTGTTCTTGGAGAAGCTGCTTTGAACTTGCAATCTATTCTTACTTCTGCCCCTGTGGTGTTTTTTTGA | 390 | 37.69 | MPEEDLLEVKFRLFDGSDIGPFRYSPASTISLLKERIVAEWPKDKKGGPKSANDIKLINAGKILENNKTVGQCRTPFGDLPITMHALVQVSLTKTKTVLLTENDICSVVLGEAALNLQSILTSAPVVFF | 129 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa3g03632 | 129 | PANTHER | UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN | 1 | 98 | IPR040015 | - | |
| Lssa3g03632 | 129 | Pfam | Ubiquitin-2 like Rad60 SUMO-like | 5 | 97 | IPR039540 | - | |
| Lssa3g03632 | 129 | ProSiteProfiles | Ubiquitin domain profile. | 7 | 73 | IPR000626 | GO:0005515(InterPro) | |
| Lssa3g03632 | 129 | CDD | Ubl-MUBs-plant | 6 | 89 | - | - | |
| Lssa3g03632 | 129 | SUPERFAMILY | Ubiquitin-like | 2 | 93 | IPR029071 | - | |
| Lssa3g03632 | 129 | Gene3D | - | 1 | 97 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa3g03632 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 125879 | Lssa2g03034 | Lssa3g03632 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr3:211968079 | Lssa9g01521 | Lssa-Chr9:48595033 | dispersed | |
| Lssa | Lssa-Chr2:188317106 | Lssa3g03632 | Lssa-Chr3:211968079 | wgd |