AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa3g03633 ATGTATAAATATATATATAAAAATACGCATATCACATATCAAACACCTCCTGATTTACATGTTTTTACACCACAAGTTAATGGTTTGGGTGTTGTGGAAGTGCTCAAGGGGCATCATGCTACATTGAGAGATTGCATTGAGCAGCTATCATCTGTAGAATCATCTAGAATTAATCTTGTTTCTTATCTGCGCGAGGCTCTTCAGGAGCAGGCTGCACATACACAATCCGAAAAAACCGATAATTTCTGCCGCCAGTTAATGAATCCCAGTGCCACCAAATTACTCCCGGAGCAGACCATAACCACCACCACCGCCACTACCAAACCCCACAATTACATTCCCGGAACCGGAGAACAGTCTGCAGCGGTAATGTACACACACCAAGTTCCGATCACTGAGGAGGAAATCACCAAATCTGCCGCCGCCGAAGTGGCGGCAAAGCTCACCGCCTCCACATCATCCGCTGAGATGCTCTCTTACGTCCTCTCTTCCTTAGCATCCGAGGGCGTTATCGTAAATTCCACTACAGAATCCTCCTCAAACAACCACCCTCCCGAAAAACGAGCCAAAATCGAGACAACCGATCACCACTACCAACCACCGCCACCATCATCTCCGCCACCTCCGCTACCTATGCCGCCAATGCAAGCTTACCCACTGCCACCGTTCATGGTGGCGGTACCGTATAACTATAACCAGCAAGCACCACCGCCTTTGCCGGGGTATCCCACCGTTGGGCCGCTAATCAACAGTGGTTCTTCATACACACCGGCGGTGGTGCCGCCACCACCTGGCGGTTACCATAATTATCAAATGGAAGGTGGGTACACTAGCCAACCGATGGCACCGATGTCTAGACAATAG 864 49.54 MYKYIYKNTHITYQTPPDLHVFTPQVNGLGVVEVLKGHHATLRDCIEQLSSVESSRINLVSYLREALQEQAAHTQSEKTDNFCRQLMNPSATKLLPEQTITTTTATTKPHNYIPGTGEQSAAVMYTHQVPITEEEITKSAAAEVAAKLTASTSSAEMLSYVLSSLASEGVIVNSTTESSSNNHPPEKRAKIETTDHHYQPPPPSSPPPPLPMPPMQAYPLPPFMVAVPYNYNQQAPPPLPGYPTVGPLINSGSSYTPAVVPPPPGGYHNYQMEGGYTSQPMAPMSRQ 287
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa3g03633 287 MobiDBLite consensus disorder prediction 194 213 - -
Lssa3g03633 287 MobiDBLite consensus disorder prediction 199 213 - -
Lssa3g03633 287 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN 35 285 - GO:0000993(PANTHER)|GO:0031124(PANTHER)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa3g03633 K15559 regulator of Ty1 transposition protein 103
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
125880 Lssa2g03035 Lssa3g03633
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr2:188320934 Lssa3g03633 Lssa-Chr3:212547835 wgd