Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa3g03641	ATGAAGTCATCACTGGGGAAGCTCGGGCGGAAATTATCGTTACAGAAGAGCGATGTGAAGGAGGTGAGGGATCATCAGCCTTCCGCCCATATAGATGAGCTTGCTCAGGCTTCCAAGGATATGCAAGATATGAGAAACTGCTATGATGGTTTATTATCTGCAGCAGCTGCAACAGCAAATAGTATATACGAATTTTCGGAGTCACTAAATGAAATGGGGAGCTGTTTGCTGGGGAAAACTGGTGCAGATGCTGATGATGAAAGTGGAAAAATGTTATCAACTTTAGGGGATATGCAATTGGAACTTCAGAAAATTGCTGATACTTATCGATCTGATGTGGTTGTGACAATTACTAACCCATCAGAGTCTCTCCTTAGTGAACTAAGGAAAGTGGAGGAAATGAAACTTCAATGTGATGAAAAAAGGGAGGTTTATGAATACATGATGGCACAACATAAAGAGAAAGGGAAACAGAGAAATGGAAAAGTTGAACAAAAATTAAGAGAAGCTCAAGAGGAATTTGATGAAGTGACTAGACTTTGTGTTTTTAGGGTGAAATCTCTTAAAGAAGGACAATGTCGAAGTCTTTTAACACAAGCTGCTCGTCATCATGCTGCACAGCAGTTGAATTTTTTTCGCAAGGGACTTAAAGTTCTAGAAGCAGTGGAACCTTCCATAAGAAATGTTGCAGAAAAACATCGAATTGATTACCAAATGACAGGAGGTGGAGGTGAAGGTGAAGGTGAACCAATGAGTGGAGGATATGAAAGCACAGATGATGGAGAATTGAGTTTTGATTATAACAAACAAAAGAAACAGCTGCTTGATGATGATGATGGCAGCTCCCCAAATCCAATGGAGCTGGACCAAGTGGATGTTCCATATCTAGAAGATTCAGAAATGAATCGGAATAAACATAAAGGGGAGCAGCTTTTTGGAAGGCAAACTAGAGTAAGCAGCTATTCCGCCCCACTATTCCCAGATAAAATCGACACATCAGAAAAACCAAAAGGAACACAACCCCCAAGGAAGTTTTACTCTTATGTCCTTCCTCCTCCCACTGTAGACACCCGGAATCCAATTTCAAAACCCTCCACCTCCTCCTCCTCCTCCTCCATTTCTCATTCCATTCCATTCCAGCCAATTCCAGTGGAAACCGATTCCAATTCCGGTTATTCCGCCACCCAACTACCTGCCCCAGCCCCTTCTACCGGAAGATTTTCAGACTCCCAAACCAAAGCCGAGAGTAACATAGTCAAAAGACAATCCTATTCCGGTCCATTACCGCCAAGTAAACAATTTTCATTCAAAATCGCGTCCACTAGCGGCCCGATTACCTCCGAGCTTCCACAACCGCCATCACGGATTCCGGTGTCTCAGCCGTCTCGGAGTGCCTCACCGCCGCCGATATCTTCGCCCAAAATAAGTGAGCTTCATGAGCTTCCAAGGCCGCCGGGTAATTTACCCTTTTCAAAGTCGGTTGCTATTTCTGGTATTAATTTGAGTAGACATTCGGCGCCTTTGTATTCCAAGAATCAAGAAATCTCTCCACCAAATAAACGGGCTATGCTAACGTCTATTTCTGCATCTCCTCTTCCACTTCCACCTCAAGTTGTTCCTCGAAGCTTTTCCATACCCTCCAAGGGAAATGACGTAAATACCCTTGGGTAG	1671	43.57	MKSSLGKLGRKLSLQKSDVKEVRDHQPSAHIDELAQASKDMQDMRNCYDGLLSAAAATANSIYEFSESLNEMGSCLLGKTGADADDESGKMLSTLGDMQLELQKIADTYRSDVVVTITNPSESLLSELRKVEEMKLQCDEKREVYEYMMAQHKEKGKQRNGKVEQKLREAQEEFDEVTRLCVFRVKSLKEGQCRSLLTQAARHHAAQQLNFFRKGLKVLEAVEPSIRNVAEKHRIDYQMTGGGGEGEGEPMSGGYESTDDGELSFDYNKQKKQLLDDDDGSSPNPMELDQVDVPYLEDSEMNRNKHKGEQLFGRQTRVSSYSAPLFPDKIDTSEKPKGTQPPRKFYSYVLPPPTVDTRNPISKPSTSSSSSSISHSIPFQPIPVETDSNSGYSATQLPAPAPSTGRFSDSQTKAESNIVKRQSYSGPLPPSKQFSFKIASTSGPITSELPQPPSRIPVSQPSRSASPPPISSPKISELHELPRPPGNLPFSKSVAISGINLSRHSAPLYSKNQEISPPNKRAMLTSISASPLPLPPQVVPRSFSIPSKGNDVNTLG	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	527	556	-	-
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	1	29	-	-
	Lssa3g03641	556	PANTHER	HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE	1	553	IPR037488	-
	Lssa3g03641	556	Coils	Coil	153	180	-	-
	Lssa3g03641	556	Gene3D	Arfaptin homology (AH) domain-BAR domain	25	238	IPR027267	-
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	239	263	-	-
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	450	468	-	-
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	13	29	-	-
	Lssa3g03641	556	CDD	BAR	40	225	-	-
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	359	449	-	-
	Lssa3g03641	556	SUPERFAMILY	BAR-IMD domain-like	32	227	IPR027267	-
	Lssa3g03641	556	Pfam	Bin-amphiphysin-Rvs domain for vesicular trafficking	39	222	IPR018859	-
	Lssa3g03641	556	MobiDBLite	consensus disorder prediction	307	491	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa3g03641	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	125882	Lssa2g03040	Lssa3g03641

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr4:1530419	Lssa3g03641	Lssa-Chr3:213818643	transposed
	Lssa	Lssa-Chr2:188363669	Lssa3g03641	Lssa-Chr3:213818643	wgd