AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa3g03670 ATGGAGGACAGCTTCAAGGTTCGAGTTGATAGGGCTTTCGGATCTCTCGAAGCTTCTTCTTCATCTACAATCAAATCAACATCGTCGTCCTTAAGCTCTCTCTGGTGCCTCACCGACGAAGAGATCAAGAGAAACGAATGGATTCAAGATAAAATCACCGTTCACAAAGACAAAGATGACGAACACATCCACCGTCTCAAAACCCCCAAAATCTATTCTTCCTTTCTACAAGGCCTTCTTGCCGAACCCTCAACCTCTCATCAAGACCTGGAGTCTGACATTCAAGAGCTTGAGGACGAAGAAGACGAAGAACAACAGCCGCCGCTGTCGAAACCGGACGATCATAGCAACGACGACTGGAATATTCGATCTTCCGTCGGCATGGACTGCACTCTCGACAACGAGGAAGAGGAAGATGGTTACGACAAGGTGGCATTAGGCAGGGAAGAATCTACAGATCGTTTTTACATGAGAGACGTGAACGATTATGAAGTCGAGATGGATTCCAACAATGAGCTTCCGGACTCGATCACCGATGTTATCAGGGATCCCCGAGCGAATCACATGGCTGCAAAACTCAGGCTTAAAGAAGACGAAGAATCTGCTAGAAAATTGGGGTTGCAGGTTTCCGAGAACAACAACATACAGGAATCAACAACGACGGAGAATCAGATCTCTACACCTTTTGTTCCAGATTATGTACGTAATCCTTCAAAATACACACATTATACCTTTGATTCGATGGATGATGCTGATGAAGAAACAAATAGAAAAGCTTACATGGATTTTTTCAATTTGCTGAAGGGGTCTGGTGGTGGTGGTGGTGGTGACATGGAGACTGAAGATGTTTCCATGGAGTCTCAAACATCAATTGTGTTTACTCCAAGAAAGAAGAAGTCGAGTGATGATACGATGAAGAAAAGCAAGGCAGATGCAGGATACAAGAAAGTTGTTCCTGCTGGTATTGCTGGTGAGGATGTTGAAGACAGTGTGGGGGTTTGTGTGATGGATGAAGATGAGGCTGAAATGGCAATGAATAAGCAGAGAGGTGGTCGGAGGTATAGGACGAAGGCCAGTTCTGATGTTGAATGA 1092 44.96 MEDSFKVRVDRAFGSLEASSSSTIKSTSSSLSSLWCLTDEEIKRNEWIQDKITVHKDKDDEHIHRLKTPKIYSSFLQGLLAEPSTSHQDLESDIQELEDEEDEEQQPPLSKPDDHSNDDWNIRSSVGMDCTLDNEEEEDGYDKVALGREESTDRFYMRDVNDYEVEMDSNNELPDSITDVIRDPRANHMAAKLRLKEDEESARKLGLQVSENNNIQESTTTENQISTPFVPDYVRNPSKYTHYTFDSMDDADEETNRKAYMDFFNLLKGSGGGGGGDMETEDVSMESQTSIVFTPRKKKSSDDTMKKSKADAGYKKVVPAGIAGEDVEDSVGVCVMDEDEAEMAMNKQRGGRRYRTKASSDVE 363
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa3g03670 363 MobiDBLite consensus disorder prediction 271 311 - -
Lssa3g03670 363 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 362 IPR029338 -
Lssa3g03670 363 MobiDBLite consensus disorder prediction 207 231 - -
Lssa3g03670 363 MobiDBLite consensus disorder prediction 83 140 - -
Lssa3g03670 363 MobiDBLite consensus disorder prediction 93 107 - -
Lssa3g03670 363 Coils Coil 87 107 - -
Lssa3g03670 363 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 202 264 IPR029338 -
Lssa3g03670 363 MobiDBLite consensus disorder prediction 344 363 - -
Lssa3g03670 363 MobiDBLite consensus disorder prediction 296 311 - -
Lssa3g03670 363 MobiDBLite consensus disorder prediction 207 232 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa3g03670 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr3:216331121 Lssa4g00032 Lssa-Chr4:531592 dispersed