AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa3g03673 ATGGCGGTAGCGAAGCTGCTTCTCCCGTCGTCTCTCAATCTCCCATCCAAATTGAAAATCACTAGAGAATCTCCCTCTCTCCATAATCAGCCATGGAGTTTAAAGAAGAACAAGCGACGGCATCCACCTGGGATTTCCTCCTCGCTTCACGAGACTGCAACAATCGCCGTTCAAACCCCTCTGTTTGTGCTTGCAGACGCCGCCGTCGGCTATTCCAGTGCCAGCTATTACACCTCCTTGGGTCTATTCGTCATCTCCGTTCCAGGTCTTTGGTCCCTTATCAAACGCTCTGTTAAATCCAAGGTTGTGCAAAAGACATTCGTAGAGCAACTAAAGGAAGGAAAAAAGAAGGAACCTAACCAGATCGCCGGAGAAATTCTCTCCTTCTTCACTCGCAACAACTTCTCAGTGCTAGATAAAGGAGAGACAATCACGTTCGAAGGCACGATGGTTCCGAGCAGAGGGCAAGCGGCGCTGCTTACATTTTGCACCTGTATCAGCCTCGGAAGTGTGGCTCTCGTGCTTACCATCACCGCTCCAGACGTCGGCAACAATTGGTTCGGCCTCATCGTTTTCAGCCCATTGGCTGGAGCGTATTACTGGAAGCGAGCATCGAGAAAGGAGCAGATTAAGGTGAAGATGATGGTGGCGGAAGACGGGACGCTGTCGGAGATTGTGGTTCAAGGGGACGATCAGCAAGTTGAGCAGATGAGGAAGGAGTTGCAGTTGAGTGAGAAAGGCATGGTTTACGTTAAAGGCATCTTTGAGAGATGA 774 50.13 MAVAKLLLPSSLNLPSKLKITRESPSLHNQPWSLKKNKRRHPPGISSSLHETATIAVQTPLFVLADAAVGYSSASYYTSLGLFVISVPGLWSLIKRSVKSKVVQKTFVEQLKEGKKKEPNQIAGEILSFFTRNNFSVLDKGETITFEGTMVPSRGQAALLTFCTCISLGSVALVLTITAPDVGNNWFGLIVFSPLAGAYYWKRASRKEQIKVKMMVAEDGTLSEIVVQGDDQQVEQMRKELQLSEKGMVYVKGIFER 257
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa3g03673 257 Pfam Cofactor assembly of complex C subunit B 75 243 IPR021919 -
Lssa3g03673 257 PANTHER - 2 257 IPR021919 -
Lssa3g03673 257 MobiDBLite consensus disorder prediction 26 46 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa3g03673 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr3:216571024 Lssa8g05443 Lssa-Chr8:308192031 dispersed