Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa3g03684 | ATGGAGTTACAAAACCAGGTGGCGCATGCGGTTCACGTCCTGAATCACGATGCTCAATCTTGCAATCGCGTCTCTGCTAATCAGTGGCTGGTTCAGTTCCAGCAGACAGATGCCGCTTGGGAGATCGCCACCTCAATTCTGACCTCTGACCATCCTAAGCCATACGTTTCCGACTTGGAAGTTGAGTTCTTCGCTGCTCAAGTTCTTAAGCGAAAGATCCAAAATGAAGGACATTGTCTACAACTGGAAGCAAAGGAATCTCTTGTTAATGCTCTCCTTCTGGCTGCTAAAAGATTTAGTTTGGGCCCTCCCCAGCTCTTAACACAAATTTGCCTGGCTCTATGCACTCTCATACTTCATGCTGTGGAATACCACAAACCAATTGAGAAGCTATTTTACAGTCTTCAGAATCTTCAAGGTCAGAATGATGGCAATATTGCTGTTTTAGAAATGCTCACAGTCTTACCTGAAGTTGTTGAAGATGAATCTGCTACTTATAAGACCAAGTCTGGTCATAGAGTTGACTATGGTCCAGAGCAGCTACTCTCACATACATCACCAGTGCTAGAGTTTCTACTCCAGCAGTCGAAGGAAAGCTTTGATGGTGTGATTCAGTTACATGACAGAAGCAGAAAGATACTGCGTTGTTTGTTAAGTTGGATTCGAGCAGGATGCTTCTCAGAAATCTTACCAGTCTCTTTACTAGCCCATCCCCTTCTTAGTTTTGTTTTCAACTCCGTGCAGGTTTTGTCCTCATTTGATTTGGCAATTGAGGTTCTCATTGAGCTCGTTAGTCGACATGAGGGACTGCCACAAGTTCTTATATTGAAGGTAGGGTTTCTTAAAGATGTTCTTCTTCGAGCTTTTAGTAGTGGAGATGAGAAAGTAATTAGTGGTCTTGCATGCTTGATGTCAGAGATTGGTCAGGCTGCTCCAAGCTTGATTATAGAAGCCAATCCCGAAGCCCTTGTCCTGGTGGATGCACTTTTGAGTTGTGTATTGTTTCCAAGTCAAGATTGGGAGATTGCAGACTCAACTTTGCAGTTTTGGTGTAGTCTTGCTAGCAATATTGTCCGAATGGAAGATGAGCTGACAGAAAATAGCAAACATGTCAAAGATGTTTTTTCTCCAGTATTTTTAGCATTGCTTGATGCTCTTCTGAGTCGTTCTCAGGTGGATGACTCAACATATGGTGATACTGCAACAAGGGAGTTGCCAGATGGGCTTGCTCAGTTTAGATTAAATTTAGTTGAGCTTTTGGTGGACATTTGCCAGCTTTTGAAGTCTGCTGTGTTTTTGCAAAAGATTTTTTTCGGTGGTTGGTTGTCTTCAAACGTGCAAATTCCATGGAAGGAGGTGGAAACCAGAATGTCTGCTCTTAATGTGGTTGCTGATGTAGTACTACAAGAAGGTCAAACATTTGATCTCTCCATGGTTTTGCACTTGGTGACAATTTTATGTGACAGGGAATCATATGAACCAAAAGGCTTTATGTGCATTGTACATAGATCACTTGTAGATGTTATTGGTTCCTATTCAAAGTGGATGTCTTCTTATGTGACTAATGCCAGGCCATTACTTTTATTTTTTGCAGCTGGTATGTCAGAACCTTTATGCTCGCATGCTTGTGCAACTGCCTTTAGAAAGTTCTGTGAAGATGCTACTGCAGTTATGCACAAACCTTCAAGTTTAGAAATGTTAATGTGGATCGGAGAGGGATTGGAAAAGAGACACTTACCTTTAGAGGACGAGGCAGATGTTATTGGTGCTGTTACTTTGATACTTGCTCACCTTCCTAACACCGACTTAAGGAACAATTTGTTGCTTAAGTTGCTTTCTCCTAGCTTTGAATCTATTGGAAAACTTATTGATGGGGATCATGTCCTCACTTTGAGGCAACTACCAGCTGCTTATACTCATCTTGTCAACTCTTCCGTGAGGGGGTTTTACAGGATAGGAACGGTGTTTGGTCATCTTGTAACACCTCTCTCTACATCTCCTGACATCGACAATTCCATAATTGCCCTTCTTGAAACCTTTTGGCCTATGCTTGAAAAATTCTTTCAGTCGGAGCACATTGAGAACACAAGCTTATCCATGGCAGCATGCAGAGCTCTCTCACAGGCAATCAAATCCGCAGGTCATCACTTTGTGACACTGTTGCCCAAAATCTTAGATTACCTATCAACAAATTTTGCATCATTTCAAACTCATGAGTGCTACATTAAAGCAGCTTGTATTGTGATTGAAGAATTTGGTAACAAGGAGGAATATGGAGCTTTATTTATGAGTACGCTTGAAAGATTTACACATGCATCATCTGTAATGGCGATAAATTCTTCTTATGTGTGCGATCAAGAGCCTGATCTTGTGGAGGCTTATTGTAGTTTCACATCAATCTTTCTTTGCACCTGTCCAAAGGAAGTAGTAGCTTCTTCTGGTCCTCTTCTTGAAGTTTCACTTCAGAAAGCAGCCATATGCTGTACAGCTATGCATCGTGGAGCAGCACTTGCAGCAATGTCATATATGTCTTGTTTTCTTGAGTTTGGGGTGACTTCATTGCTGGAATCGGTGACATCCAACTCTGCATCCATGGTGGTTCAAGTAATATCTCATAGCGGGGAAGGGATTGTATCAAATGTTGTGTATGCCTTACTTGGTGTTTCCGCAATGTCAAGGGTTCACAAATCTGCAACTATCTTGCAACAGTTGGCGGCCGTATGCAGTTTTAGTGAAAAAACAAAATGGAATTCTCTTCTCTCTTGGGATTCTTTACGTGGATGGCTACATTCTGCGGTGCGGAGTCTACCAGGTGAGTATTTAAGGCATGGGGAAGCGGAATCTTTGGCACCTGTATGGCTAAAGGCTCTGGGTGATGCAGCATTTGATTATGTGGAAAGCAGAACCAGTGATGGAGACAAGAATCATAAACATATGAGGGGAAAGGGTGGAAGATTTCTCAAGTCTTTATTTCGTGAATTTGTTGATAGTCATCGAAACATTGGAACCTGA | 3012 | 42.0 | MELQNQVAHAVHVLNHDAQSCNRVSANQWLVQFQQTDAAWEIATSILTSDHPKPYVSDLEVEFFAAQVLKRKIQNEGHCLQLEAKESLVNALLLAAKRFSLGPPQLLTQICLALCTLILHAVEYHKPIEKLFYSLQNLQGQNDGNIAVLEMLTVLPEVVEDESATYKTKSGHRVDYGPEQLLSHTSPVLEFLLQQSKESFDGVIQLHDRSRKILRCLLSWIRAGCFSEILPVSLLAHPLLSFVFNSVQVLSSFDLAIEVLIELVSRHEGLPQVLILKVGFLKDVLLRAFSSGDEKVISGLACLMSEIGQAAPSLIIEANPEALVLVDALLSCVLFPSQDWEIADSTLQFWCSLASNIVRMEDELTENSKHVKDVFSPVFLALLDALLSRSQVDDSTYGDTATRELPDGLAQFRLNLVELLVDICQLLKSAVFLQKIFFGGWLSSNVQIPWKEVETRMSALNVVADVVLQEGQTFDLSMVLHLVTILCDRESYEPKGFMCIVHRSLVDVIGSYSKWMSSYVTNARPLLLFFAAGMSEPLCSHACATAFRKFCEDATAVMHKPSSLEMLMWIGEGLEKRHLPLEDEADVIGAVTLILAHLPNTDLRNNLLLKLLSPSFESIGKLIDGDHVLTLRQLPAAYTHLVNSSVRGFYRIGTVFGHLVTPLSTSPDIDNSIIALLETFWPMLEKFFQSEHIENTSLSMAACRALSQAIKSAGHHFVTLLPKILDYLSTNFASFQTHECYIKAACIVIEEFGNKEEYGALFMSTLERFTHASSVMAINSSYVCDQEPDLVEAYCSFTSIFLCTCPKEVVASSGPLLEVSLQKAAICCTAMHRGAALAAMSYMSCFLEFGVTSLLESVTSNSASMVVQVISHSGEGIVSNVVYALLGVSAMSRVHKSATILQQLAAVCSFSEKTKWNSLLSWDSLRGWLHSAVRSLPGEYLRHGEAESLAPVWLKALGDAAFDYVESRTSDGDKNHKHMRGKGGRFLKSLFREFVDSHRNIGT | 1003 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa3g03684 | 1003 | SUPERFAMILY | ARM repeat | 1 | 848 | IPR016024 | - | |
| Lssa3g03684 | 1003 | Pfam | Exportin 1-like protein | 103 | 260 | IPR013598 | - | |
| Lssa3g03684 | 1003 | PANTHER | TRANSPORTIN 3 AND IMPORTIN 13 | 5 | 1000 | IPR051345 | GO:0005737(PANTHER)|GO:0006606(PANTHER) | |
| Lssa3g03684 | 1003 | Gene3D | - | 2 | 951 | IPR011989 | - | |
| Lssa3g03684 | 1003 | Pfam | Importin-beta N-terminal domain | 26 | 93 | IPR001494 | GO:0006886(InterPro)|GO:0031267(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa3g03684 | K15436 | transportin-3 |