Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g02941	ATGGCTCAGTCGATGGTTTGTCATGTTATGTTAGTTGTGATATTCATACTGGTGGCTCTTGCTGAGGCACAAACTCCACCAGGAATTAACAACCCTAGCCATGCAACTTGTAAGGACCCGAGTTACAAAGAATGTCATAATTTGGTGCATGTTTGTCCTAAGTTTTGTCCAGATAGCTGCACTGTTAATTGTCAATCGTGCAAACCTGTTTGTGGTGGCGACATTGCACCATCACCACCAGTGTACACACCTCCAACACCAACATTGAAACCCCCAACACCATCGTCACCACCTCCCACCACACCTTCACCACCAACAGCGTCCACACCACCAACCTCTCCTTCTCCACCGATAGAGCCCACACCTCCAACACCAACACCGTCATCATCACCACCTCCACCAACCCCTTCACCACCAACTCCCTCCTCACCACCTCCAACCACCCCTTCTCCACCAACAGAATACACACCTACGACACCAACACCATCCTCACCACCCCACACCACCACCCCTTCATCACCAACAGAGTCCACACCACCAACACCAACAACATCCATACCACCACCCACCACCCCTTCACCACCAATAGAGTCCACACCTCCAACATCAACGCCATCCACACCACCTCCCACCACCCCTTCACCACCGATATCCACAACTCCAACACCAACACCATCCTCACCAACTCCCACATCCCCTTCACCACCACCAGAGTCCACACCTACAACACCAACTTCATCCACACCATCTCCCACCACCCCTTCACCACCGACATCCACAACTCCAACACCAACACCATCCTCACCAGCTCCCACCTACCCTTCACCACCAATAGAGTCCACACCTACAACACCAAGTCCATCCACTCCACCTCCCACCACCCCTTCACCAACAACAGGGTCCACACCTCCAGCACAAACACCATCCACACCACCTCCCACCACCCCTTCACCAACAACAGGGTCCACACCTCCAACACCAACACCATCCTCACACGTGCCTCCTACATGGTCTGCTCCACCTTCTAAAACAAAAAAAGTTAAATGCAAAAACCAAAACTACCCAAATTGCTACGCCTCCGAACATGTCTGCCCTGCTTCTTGTCCTGGTCAATGTGAAGTTGATTGTGTTACTTGCAAGCCAGTTTGCAATTGTGATATGCCTGGAGCAGTGTGTCAAGATCCTCGTTTCATTGGTGGTGATGGCATCACTTTCTACTTCCATGGAAAGAAGGATCAAGATTTCTGCCTTGTTGCCGATAACAACCTCCACATCAATGGCCACTTCATTGGCAAGAGAAACAGAAACATGGGGAGAGACTTTACTTGGGTCCAATCTATTGGGATTCTTTTCGACAACCACAAAGTACAACTCAGTGCGCAAAAGACTTCTTCTTGGGATGACACCATTGATCGAATCTCTGTTACATTTGATGGGGAAAACATCTTTCTCCCAAAAACCGAAGGTGCCAAATGGCAATCTTCTACGACATCAATCACTAGGATTGATGACAACAATCATATCATTGTTGAAGTTGAAAACCTCTTCAGGATCACAGCCAAAGTGGTTCCCATAACAAAAGAAGAATCAAGAATCCATAAGTATGATATAACCAGTGACGATTGCTTTGCCCATCTCGATCTGAAGTTCAAGTTCTTCTCCTTGAGTAACGAAGTGGATGGAGTTCTTGGACAAACTTATAGGAATGACTATGTGAGCAAGGTGAAGATGGGGGTATTAATGTCTGTGATGGGAGGAGATAGTAAGTTTGTGAGTACCAATTCATTTGCAACTGATTGTTCTGTTGCTAAATTTAAGGGTAGCCAGGAAGACAGTTCTTCGTTGAACTTGCAGTTGCCAAGCTTGAGTTGCCAAAGCGGTATAGAAGGGCGAGGCGTCGTATGCAAGAGATAG	1914	48.01	MAQSMVCHVMLVVIFILVALAEAQTPPGINNPSHATCKDPSYKECHNLVHVCPKFCPDSCTVNCQSCKPVCGGDIAPSPPVYTPPTPTLKPPTPSSPPPTTPSPPTASTPPTSPSPPIEPTPPTPTPSSSPPPPTPSPPTPSSPPPTTPSPPTEYTPTTPTPSSPPHTTTPSSPTESTPPTPTTSIPPPTTPSPPIESTPPTSTPSTPPPTTPSPPISTTPTPTPSSPTPTSPSPPPESTPTTPTSSTPSPTTPSPPTSTTPTPTPSSPAPTYPSPPIESTPTTPSPSTPPPTTPSPTTGSTPPAQTPSTPPPTTPSPTTGSTPPTPTPSSHVPPTWSAPPSKTKKVKCKNQNYPNCYASEHVCPASCPGQCEVDCVTCKPVCNCDMPGAVCQDPRFIGGDGITFYFHGKKDQDFCLVADNNLHINGHFIGKRNRNMGRDFTWVQSIGILFDNHKVQLSAQKTSSWDDTIDRISVTFDGENIFLPKTEGAKWQSSTTSITRIDDNNHIIVEVENLFRITAKVVPITKEESRIHKYDITSDDCFAHLDLKFKFFSLSNEVDGVLGQTYRNDYVSKVKMGVLMSVMGGDSKFVSTNSFATDCSVAKFKGSQEDSSSLNLQLPSLSCQSGIEGRGVVCKR	637

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g02941	637	Pfam	Root cap	549	605	IPR009646	-
	Lssa7g02941	637	PANTHER	ROOT CAP DOMAIN-CONTAINING PROTEIN	316	637	-	-
	Lssa7g02941	637	MobiDBLite	consensus disorder prediction	82	347	-	-
	Lssa7g02941	637	MobiDBLite	consensus disorder prediction	82	336	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g02941	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr7:155973206	Lssa7g02943	Lssa-Chr7:156062407	dispersed
	Lssa	Lssa-Chr7:155909723	Lssa7g02941	Lssa-Chr7:155973206	tandem
	Lssa	Lssa-Chr7:155973206	Lssa7g02942	Lssa-Chr7:156036832	tandem