Gene detail

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g02976	ATGGCAAATGTATCTTCTTCCTCTTCTCTTTACTCCCTTTTACCTCAACCTTCTCCTCCCAATCATCGCCACTTTGCACCACGATCTTCCTCGTTTGCTTCCCCTCATCAAATTAATGGTTTCTCATCTCTCTCGCTTCGCCAATCCAAAAAAAGTTCTCCTCTACGAGTCCTCTCCATGGGACGCCAATCTAAAGCAACAGTGGTGTCGGGGCAATCATGGAACACATCGGTTCTTGACAGCAAAACTCCGGTGCTGGTCGAGTTCTACGCCAGTTGGTGTGGACCATGTCAGATGGTGCACCGAGTGATTGAAGAAATCGCCGGCGAGTACGCCGGAAAAGTGAAGTGTTTCGTGCTGAACGCCGATCAAGACCCACGAATTGCAGAGGAATATGACATCAAAGCTGTGCCGATTGTGTTGGTGTTCAAGAATGGCGAGAAGTGTGAATCGGTGATTGGGACGATGCCTAAAGAGTTCTATGTTGCTGCCATTGAAAGGACCTTGGCTTCTTCATCTTGA	522	48.28	MANVSSSSSLYSLLPQPSPPNHRHFAPRSSSFASPHQINGFSSLSLRQSKKSSPLRVLSMGRQSKATVVSGQSWNTSVLDSKTPVLVEFYASWCGPCQMVHRVIEEIAGEYAGKVKCFVLNADQDPRIAEEYDIKAVPIVLVFKNGEKCESVIGTMPKEFYVAAIERTLASSS	173

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g02976	173	FunFam	Thioredoxin	61	172	-	-
	Lssa7g02976	173	MobiDBLite	consensus disorder prediction	1	33	-	-
	Lssa7g02976	173	ProSitePatterns	Thioredoxin family active site.	86	104	IPR017937	-
	Lssa7g02976	173	MobiDBLite	consensus disorder prediction	1	16	-	-
	Lssa7g02976	173	CDD	TRX-family	77	166	-	-
	Lssa7g02976	173	Gene3D	Glutaredoxin	67	172	-	-
	Lssa7g02976	173	Pfam	Thioredoxin	68	165	IPR013766	-
	Lssa7g02976	173	ProSiteProfiles	Thioredoxin domain profile.	55	170	IPR013766	-
	Lssa7g02976	173	PANTHER	GEO12009P1	58	169	-	GO:0005737(PANTHER)\|GO:0015035(PANTHER)
	Lssa7g02976	173	PRINTS	Thioredoxin family signature	93	102	-	-
	Lssa7g02976	173	PRINTS	Thioredoxin family signature	85	93	-	-
	Lssa7g02976	173	PRINTS	Thioredoxin family signature	133	144	-	-
	Lssa7g02976	173	SUPERFAMILY	Thioredoxin-like	63	170	IPR036249	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g02976	K03671	thioredoxin

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr7:157446867	Lssa9g03548	Lssa-Chr9:174567377	dispersed
	Lssa	Lssa-Chr7:157446867	Lssa7g03592	Lssa-Chr7:190286944	transposed