AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03014 ATGGCCCCTGCAAAGCCCAGCATTCGGTCGATCTCGCAACAAGCATTCGATGAAATGGTTAAAGAAAACATAGACGATCTAGGTATGGACCCTACGGAAGCCCTAAGCGACGCCATCGAAACCCTTACTCTTCAAGGCGTAGATCTCTCTGGTATCGTCACCTCTACACTCCCCGGAGAAATCAATCCGGTGATCCAATCACTTGACAGAATCAAACAATTACAGAGTTCGGATTGGACAGACAAAGCAGTCTTAGACGAGGCGCGATGTTTGTTAGATCATTTGACGGAATTGTCCCGTATTGAGGGATCTGGAAATGCTGCGATTGCTACAAGAAACGGAGGTGTAGAATTGATGTGCTCTGTTTGTTCGAAGCTTCGCGATATTGGCCGTGAGTCTGCACTTGTATCGGCTTTGAATGCATTGGCTGCATTTCTCCATGATCTTCAAAGTACAGAAACTTTCAGGCAAAGTGGAGGACCAAAAATCGTGATTGGTATCCTAACTGATGAAACTCAAAATGTAAACATTTTGAACAGTGCCTTCTCTGTTATTGCTGCTTCTGCAACTGGTAATGAGGTTCTCAAGGAAGCATATGTCGAATTACACATAGATGAGTTAATAGTTAAAATCATGAAGAACCATAAAAAAGGAAGCATCTCAAGTTTATATGATGCCATTCGAGTACTCTTAGCAGCTGATGATACCCGTGTAATCGCTTCACAAGTTTATGGGTATGCTCGAAAATTTGCCAAAATTGGAATTGCTGAAGCTCTTGCTGAGTCACTTGATGATGAACTTAACTCATCAAGCCTGGTATCAATAACAATTGCACTAAAAGCCATTTCAGTGAATGATGAAATATGCAGATCAGTTGCTGAAAAAGGTGGTATAGATTCACTACTCAATACTATCGATGAATCTGGCATACAAGGGAACAAAACTGTAGCCAAATCTTGCTGTTCTTTGTTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCTATAATTGAAAGGAGAGGTTTGAATAGACTCATCACACTTTCAAACAGACTTCATGATGATCCTTCTGTCATTCAAGAGGTGATGACCATCATAAGCACCCTGTGCCTGCGCTCACCTGATCATGCAGCCATGGCTATGGAAGCTGGAGCAGGAGAGCTTGCAATTCAAGCTATGAAGAAGTTTCCTGAAGCATCTCAGTTGCAGAAATATTCATGTCTCATGATTCGTAATCTTGTTGCTAGGAATACAGAAAACAGGTCTATTTTGTTGAATAATGGTATTGAGAAGATGATAAGGAATGCGAAAGAAAGCCATAAAAGTTGTAGAGAAGCTGGGACTGATGCACTTAGAGACTTGGGGGTTGAAAATTATAATTCATAG 1389 41.25 MAPAKPSIRSISQQAFDEMVKENIDDLGMDPTEALSDAIETLTLQGVDLSGIVTSTLPGEINPVIQSLDRIKQLQSSDWTDKAVLDEARCLLDHLTELSRIEGSGNAAIATRNGGVELMCSVCSKLRDIGRESALVSALNALAAFLHDLQSTETFRQSGGPKIVIGILTDETQNVNILNSAFSVIAASATGNEVLKEAYVELHIDELIVKIMKNHKKGSISSLYDAIRVLLAADDTRVIASQVYGYARKFAKIGIAEALAESLDDELNSSSLVSITIALKAISVNDEICRSVAEKGGIDSLLNTIDESGIQGNKTVAKSCCSLLSKLAGSDFNKSAIIERRGLNRLITLSNRLHDDPSVIQEVMTIISTLCLRSPDHAAMAMEAGAGELAIQAMKKFPEASQLQKYSCLMIRNLVARNTENRSILLNNGIEKMIRNAKESHKSCREAGTDALRDLGVENYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03014 462 Gene3D - 63 462 IPR011989 -
Lssa7g03014 462 PANTHER UNCHARACTERIZED 5 456 - -
Lssa7g03014 462 SUPERFAMILY ARM repeat 112 456 IPR016024 -
Lssa7g03014 462 SMART arm-5 285 329 IPR000225 GO:0005515(InterPro)
Lssa7g03014 462 SMART arm-5 330 372 IPR000225 GO:0005515(InterPro)
Lssa7g03014 462 SMART arm-5 374 416 IPR000225 GO:0005515(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03014 K24166 armadillo repeat-containing protein 6