Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03033	ATGGAAACATTACAGGATCTGATCGAAGAAGCAAAGCTTCGTACTGTATGGTGGGCTATTTGTATTTTCGCTGTCACGTACTTTTTAACCCACACCAGTAAATCGATGTGGATGAATGTTCCTATAGCAATTCTTCTGGTATCAGGCGTTCACATTTTAATAACCGAAGTGGATTTCCATTGGAAGATCAGGAAATCACGGCGACATTCATATCTAGCACACTTGGAGAAAAAACAATTGTCTGTGAATGATTCTCGTCTCAACACCTTGCCTCCTCCACCTAAATGGAAACGGAAGATTGATTCTCCAGTAGTTGAGGCTGCCATGGAAGATTTTACTAACAAGATTTTACAAGAATTTGTGGTTGATCTCTGGTATTCAGATATAACACCTGACAAGGAAGCTCCACAGCTCATACATGCTATTATCATGGATATTCTTGCTGAAATTTCCATGAGAGTCAAAGACATAAACCTTGTTGACATGCTAACAAGGGATGTAGTTGACCTAATAGGGGATCACCTAGAGCTTTTCAGGAAAAACCAAGCTTCTATTGGGAGGGAGGTTATGGTGACACTATCTTCTGAAGAAAGAGATGAAAGGTTGAAACACCATCTCATGGCTTCAAAGGAGCTTCATCCAGCTTTGATATCTCCCGAGAGTGAGTACAAGTTTCTTAAGCGGATTATGGGAGCACTTTTGGCTGCAGTTCTTAGACCAAGAGAAGCTCAATGCCCTTTAGTTCGATGCATTACACGAGAGCTTTTAACATGCTTAGTAATGGAACCTGTAATGAGATTCGCAAGCCCTGGGCGTATCAATGAGTTGATTGAGGGTATTTTTCTTGCTACAAATAAGGGAGAGAAAGAAACAGCTGATGATCAATCTAATGTCACTGTTCAACCCCAGAATCAACCTTCTGTTACAAACAATGAAAAAGGTCCAGAGTCAAACATTGGGTCTTCTTCTATTCAAAAGTTAGAGAAAACACCATCTACTTCTAACATCCAAAAGGAATCTTCTACAACTGTAAACCCATCTGCCACCATGACTAGTGGGCCCATCCAAGATGAATCAATTCCTACACGGACTTCTGATTGGGCCCGTGTTCTTGAAGCAGCAACCCAAAGAAGGACAGAAGTTCTTCAACCAGAGAATCTTGAAAACATGTGGACTAAAGGAAGAAACTATATGAAGAAATCTCAAAAGAATTCTGCTTCAGGTATCATAAAAGGTGGAATCAATGAGAGTTCTAATCTTGATACAGGATTTGATCAACAAAGAGACCAAATTCTTGATGGTGGACAAAACAAGACACCAACTCGGTTATCTTTAGTTGATGACAATTTGAATTTTGATTTTGGAAGTGATGGGAAGTTGAAGAGATTAAATAGTGCATCTGAGTCAAACATTCAAACTTTGAGTGAAACTGCATCTCCAATTCAAGTTGGAGGATCTGGAACTATTATCCCAGAGTTCTATAGTGTGAATCCTGGAAGAGATAATGATGCACAAAGTGTTAATAATATTGCTTCTGATAATAAACTGATAAGAACTGAAGGGTATGTTCCAAAGCTTAGGTGTCGGGTTTTAGGAGCATTCTTTGAGAATATTGACTCAAAATCCTTTGCAGTCTATTCAATTGCAGTGACAGATGCTGATAACAAAACTTGGTTTGTGAAAAGAAGATACAGGAATTTTGAAAGATTACACAGACATCTTAAGGACATTCCCAATTATACATTACATTTGCCTCCTAAAAGAATATTCTCATCTAGCACAGAAGATGCATTTGTTCACCAACGATGTATACAGCTTGATAAATATCTCAAAGAACTTTTGTCTATTGCTAATATCGCTGAGCAACATGAAGTATGGGACTTCTTGAGCATGTCTTCAAAGAGTTACTCTTTTGGAAGGTCATCGTCGGCAGTGAGAGCCTTAGCAGTCAACGTGGATGATGCTGTGGATGACATTGTACGCCAATTCAAAGGTGGAATAATGAGAAAATCCGTGGGCCCAGGTGGGTCCCCTTCCGAATTTTCTTCATCTTCTTCTTCAGCTGCAAACAGAAACATGACATGGGAAACAAATGAAGCAAATGATTCACCATTAAAGCAACCTATTTTTGATATGGGAAACAATAACATTGTTTCTGATTATGAAGAAGGTGAAAAAGATAACAAGACAATTGTTAACAATGAGGAAATGGAATCAATGGGACAAGTTTACGGGGGCTATTTGGACAATGAGGTGAATTTTAAAGCAGGACTTTCACCAAAAATTGTTAATAAAAATGATGAACAGAATAAAAATTTGGTTTTGGAAAAGAAAAATAGTTCAGAGGTCAGATCTGAAGTGTTGACCATGGCTGCAAATTTTCCTTCAACTTCTAAAGAAGATCCACTTGGTATGCCAGCAGAGTGGTCCCCACCTAATGTAAGTGTTCCTTTGCTAAATTTGGTAGACAAGATATTTCAACTCAACAGAAGAGGCTGGTTGAGACGTCAGGTTTTTTGGATGTCAAAGCAAATATTACAACTGATGATGGAAGATGCTATTGATGATTGGCTGTTGAGACAAATTCAATTGCTTAGGAGAGATGACATTGTTGCTCAAGGCATCCGTTGGATCCAAGATATTCTATGGCCCGAAGGCACGTTTTTTCTTAAAGTCAAGTCAAGTCAAACGGATTCTTCTCAAACAAATGAAGGAGCTGCCCGAGCACCTTCGGGCAGCAAGGCTAATAAACAAGGGTCGTTTGAGGAGCAACTTGAGGCTGCCCGAAGAGCTAGTGATATAAAAAAGATGATATTTAAGGGTGCGCCTACTACATTGGTGAGCTTGATTGGACGTAAGCAATACAAGCGATGTGCTAAAGATGTGTATTATTTTCTCCAGTCTGCTGTATGTTTGAAGCAACTGGCGTATGGTTTACTTGAACTTGTACTTATAACGGTTTTTCCAGAGCTTCAAGAGATTATATCAAATGTTCATGAGAAGCAAAAAGGGCAAGGAGTGTAG	3024	39.09	METLQDLIEEAKLRTVWWAICIFAVTYFLTHTSKSMWMNVPIAILLVSGVHILITEVDFHWKIRKSRRHSYLAHLEKKQLSVNDSRLNTLPPPPKWKRKIDSPVVEAAMEDFTNKILQEFVVDLWYSDITPDKEAPQLIHAIIMDILAEISMRVKDINLVDMLTRDVVDLIGDHLELFRKNQASIGREVMVTLSSEERDERLKHHLMASKELHPALISPESEYKFLKRIMGALLAAVLRPREAQCPLVRCITRELLTCLVMEPVMRFASPGRINELIEGIFLATNKGEKETADDQSNVTVQPQNQPSVTNNEKGPESNIGSSSIQKLEKTPSTSNIQKESSTTVNPSATMTSGPIQDESIPTRTSDWARVLEAATQRRTEVLQPENLENMWTKGRNYMKKSQKNSASGIIKGGINESSNLDTGFDQQRDQILDGGQNKTPTRLSLVDDNLNFDFGSDGKLKRLNSASESNIQTLSETASPIQVGGSGTIIPEFYSVNPGRDNDAQSVNNIASDNKLIRTEGYVPKLRCRVLGAFFENIDSKSFAVYSIAVTDADNKTWFVKRRYRNFERLHRHLKDIPNYTLHLPPKRIFSSSTEDAFVHQRCIQLDKYLKELLSIANIAEQHEVWDFLSMSSKSYSFGRSSSAVRALAVNVDDAVDDIVRQFKGGIMRKSVGPGGSPSEFSSSSSSAANRNMTWETNEANDSPLKQPIFDMGNNNIVSDYEEGEKDNKTIVNNEEMESMGQVYGGYLDNEVNFKAGLSPKIVNKNDEQNKNLVLEKKNSSEVRSEVLTMAANFPSTSKEDPLGMPAEWSPPNVSVPLLNLVDKIFQLNRRGWLRRQVFWMSKQILQLMMEDAIDDWLLRQIQLLRRDDIVAQGIRWIQDILWPEGTFFLKVKSSQTDSSQTNEGAARAPSGSKANKQGSFEEQLEAARRASDIKKMIFKGAPTTLVSLIGRKQYKRCAKDVYYFLQSAVCLKQLAYGLLELVLITVFPELQEIISNVHEKQKGQGV	1007

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03033	1007	Pfam	PXA domain	102	278	IPR003114	-
	Lssa7g03033	1007	Pfam	Sorting nexin C terminal	833	968	IPR013937	-
	Lssa7g03033	1007	ProSiteProfiles	PXA domain profile.	102	285	IPR003114	-
	Lssa7g03033	1007	MobiDBLite	consensus disorder prediction	294	361	-	-
	Lssa7g03033	1007	SMART	PX-2	522	632	IPR001683	GO:0035091(InterPro)
	Lssa7g03033	1007	MobiDBLite	consensus disorder prediction	288	361	-	-
	Lssa7g03033	1007	PANTHER	PX SERINE-THREONINE KINASE PXK	3	1002	IPR051837	-
	Lssa7g03033	1007	ProSiteProfiles	PX domain profile.	524	636	IPR001683	GO:0035091(InterPro)
	Lssa7g03033	1007	CDD	PX-SNX19-like-plant	526	630	-	-
	Lssa7g03033	1007	MobiDBLite	consensus disorder prediction	676	690	-	-
	Lssa7g03033	1007	SUPERFAMILY	PX domain	526	633	IPR036871	GO:0035091(InterPro)
	Lssa7g03033	1007	Gene3D	-	530	640	IPR036871	GO:0035091(InterPro)
	Lssa7g03033	1007	Pfam	PX domain	554	630	IPR001683	GO:0035091(InterPro)
	Lssa7g03033	1007	MobiDBLite	consensus disorder prediction	670	690	-	-
	Lssa7g03033	1007	MobiDBLite	consensus disorder prediction	899	920	-	-
	Lssa7g03033	1007	SMART	PXA-3	102	285	IPR003114	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03033	K17925	sorting nexin-13

Event-related genes

Select	Gene_1	Gene_2	Event_name
	127440	Lssa5g03640	Lssa7g03033

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr7:159677735	Lssa8g03246	Lssa-Chr8:138929737	dispersed
	Lssa	Lssa-Chr4:101431956	Lssa7g03033	Lssa-Chr7:159677735	transposed
	Lssa	Lssa-Chr4:185967293	Lssa7g03033	Lssa-Chr7:159677735	transposed
	Lssa	Lssa-Chr6:64192982	Lssa7g03033	Lssa-Chr7:159677735	transposed
	Lssa	Lssa-Chr5:264812167	Lssa7g03033	Lssa-Chr7:159677735	wgd