Gene detail

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03045	ATGAAGGGAGCTAAGAATTACTTGAGGATGTCGACTGATCCAACTCTATCAGAAGCAGCTTCCAAGTTGATCAACTCCGATTTGAAAGATATCGGAGAAGCTACGAGGAAATTGGCTGATCATGTCATCAAGCTCGGAGTCAGCGGTGGTTTCATCACTACCTGTCTTCAATGGCTCGCTTGCTTCGCCGCCATTTATTTGCTGATACTCGATCGGACAAACTGGAGGACGAAGATCCTCACCTCACTTTTGGTCCCCTACATCTTCTTGACTCTTCCTGAGTGGCTCTTCGGAATTTTGCACGGAGACATCGGGAAATGGATCACTTTAGTCGGAGTCGTATTGCGCCTCTTCTTCCGTGAACATTACCCAGAATATCTAGAGTTGCCGGGATCGTTGCTCCTTTTGGTTGTGGTAGCTCCGAACTTCGTCGCCGGCTATGTCAGAGTAGGGTGGATCGGAGTGATTGTCTGCTTGGTTATCGGATGCTATTTGCTTCAAGAACACATCAGAGCTTCTGGAGGATTCAAGAACGCTTTCACCAAGAGCAATGGCATTTCCAACACCATCGGTATCGTTCTCTTGTTCGTCTTCCCTGTCTGGGCTATAATCGGGTTAATATTCTGA	627	47.37	MKGAKNYLRMSTDPTLSEAASKLINSDLKDIGEATRKLADHVIKLGVSGGFITTCLQWLACFAAIYLLILDRTNWRTKILTSLLVPYIFLTLPEWLFGILHGDIGKWITLVGVVLRLFFREHYPEYLELPGSLLLLVVVAPNFVAGYVRVGWIGVIVCLVIGCYLLQEHIRASGGFKNAFTKSNGISNTIGIVLLFVFPVWAIIGLIF	208

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03045	208	PANTHER	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	8	203	IPR008892	GO:0016020(InterPro)
	Lssa7g03045	208	Pfam	Cold acclimation protein WCOR413	18	195	IPR008892	GO:0016020(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03045	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr4:392545200	Lssa7g03045	Lssa-Chr7:160783443	dispersed
	Lssa	Lssa-Chr7:160783443	Lssa8g05169	Lssa-Chr8:279291180	dispersed
	Lssa	Lssa-Chr7:160783443	Lssa7g03046	Lssa-Chr7:160788089	tandem