AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03053 ATGGATGAAACGGAGAACCTGTCGGAAGCCAAGAGAACCACCGTCGGGCCGCCGTCCGTGTTGGAGTACCTGGACCCCAACTACTGGAATGAGAGGTTTACTTCTGAAGACCATTACGAATGGCTCAAAGATTACTCTCATTTTCGTCATCTCATTCAGCAGCATATCAAACCTTCTTCTTCTGTATTGGAACTGGGGTGTGGAAACTCACAACTATCTGACGAATTATACAAAGAAGGAATCACCAAGCTAACCTGCATCGATCTATCTTCAGTTGCAGTTGAGAAGAAGAAGAAACAGTTGTTGTCCAAAGGCTACAATGATATCAAGGTCTTGGAAGGCGACATGTTGAACCTTTCATTTGATGATGAGGCATTTGATGTTGTTATAGAGAAAGGAACAATGGATGTTTTGTTCGTGGACAGTGGCGACCCATGGAACCCAAAGCCTGAAGTTGTAAAAAAAGCAATGGCAATGCTTAGAGGTGTTCACAGGGTTTTGAAATCGGATGGGATTTTTATTTCAATCGCTTTTGGTCAGCCACATTTTAGACGACCAATGTTTAATGCTCATGAATTTACGTGGTCAATTGAGTACACTACGTTTGGCGATGGGTTTCATTATTTCTTTTACATCTTGAGGAAGGGATGTAGATTGTTGGACGTGGATGAAGATGTGAAGAAGGTTGATGCACATTGTCTTAACCTTTATCAAGATGAATTGGAGGATGAAGATTACTTGTTTCGTACCAATATTGATGACGTGGATGACAGATGA 777 41.7 MDETENLSEAKRTTVGPPSVLEYLDPNYWNERFTSEDHYEWLKDYSHFRHLIQQHIKPSSSVLELGCGNSQLSDELYKEGITKLTCIDLSSVAVEKKKKQLLSKGYNDIKVLEGDMLNLSFDDEAFDVVIEKGTMDVLFVDSGDPWNPKPEVVKKAMAMLRGVHRVLKSDGIFISIAFGQPHFRRPMFNAHEFTWSIEYTTFGDGFHYFFYILRKGCRLLDVDEDVKKVDAHCLNLYQDELEDEDYLFRTNIDDVDDR 258
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03053 258 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 22 231 IPR029063 -
Lssa7g03053 258 CDD AdoMet-MTases 62 178 - -
Lssa7g03053 258 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 15 216 IPR051419 -
Lssa7g03053 258 Pfam Methyltransferase domain 57 178 IPR025714 -
Lssa7g03053 258 Gene3D Vaccinia Virus protein VP39 21 230 IPR029063 -
Lssa7g03053 258 FunFam EEF1A lysine methyltransferase 4 21 232 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03053 K22857 EEF1A lysine methyltransferase 4 [EC:2.1.1.-]