Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03060 | ATGTCTAAATGCTCATTAAGGTCTTCCAATGAGCGATTGCAGTGGCTAGTTAAGAGCGAAAATCAGAAAGAGGAAGAAGGTGAAGCGCAGGCTGTGATAATTGGTGGTATGGTGTTAGACATACACGCCATTCCTTCTATTCCTCCAAACCCTAGAACCACCGTTCCTGGCAAGGTGCGATATGCAGCAGGAGGTGTAGCAAGGAACATTGCCGAATGTGTATCAAAGCTTGGAACAAAGCCTTTCATGATAAGCGCATTAGGATCGGACATCGCAGGAAATATGCTGTTAGAGTACTGGAAATCTACAGGATTATCAACAGAAGGTATTCGAATGGGCAATGAGATACAGACTCCAGTTGTATCCATTGTCTTTGATACTGAAGGAGAATCTGCAGCTGCTGTTGCAAGTGTTGAATCTCTTGAACAATTTCTTACACCCAAATGGATTCAACAATTTAAATCAAATATTTCATCTGCTCCTATTGTCATGGTTGATGCAAACTTAAGTCCATTAGCTCTTGAAGCATCTTGTCAATTGGCAGCAGAGGTGGGTACCCCAGTGTGGTTTGAGCCTGTATCTGTAGCCAAGTCAAGAAGAATTGTTTCAGTTGCCAAGTATATAACCTTCACTTCACCTAATGAAGATGAATTAATTGCTATGGCAAATGCTCTATCTCCCAAACACACCTTCTCCCCAATTCAAAAAGAAGCCTCCACAATAACCTCTCTATTCCAACAACTAAAACCAGCAATCTCAATTTTGTTAGAAAAAGGCATCAAAGTAGTCATTCTAACCCTTGGATCAAAAGGCGTATTATTATGTTCCAAAAAACACTTCAATTTCCTTCATTCTATTTGCCCAAAAAGAAACAACAATAACAAAAGGTTGCAAGAAGCTATAAATCTAGTCTGCCCGGTGGGCCGGTTTTCCGGCGGTGGTGGTGGAGGTGTGGTCCATTTTCCGGCGGTGTCATTGGCGGCAGTTGTGAGGTTGACCGGAGCTGGGGATTGTTTGGTGGGTGGTGTGGTGGCGTCTGTTTGTGGTGGTTTGGATTTAATGCAAAGTGTTGCAGTTGGAATTGCAACTGCTAAAGCTGCTGTTGAAGTGGAGACCAATGTGCCTCTTCAATTTGATTTCGACCATATTGCAGAGGATGCAAGATCGGTGTACTTGGGTGCAAAGGTTGTTTTTTCTCAGTCTATGTTGTAA | 1212 | 42.66 | MSKCSLRSSNERLQWLVKSENQKEEEGEAQAVIIGGMVLDIHAIPSIPPNPRTTVPGKVRYAAGGVARNIAECVSKLGTKPFMISALGSDIAGNMLLEYWKSTGLSTEGIRMGNEIQTPVVSIVFDTEGESAAAVASVESLEQFLTPKWIQQFKSNISSAPIVMVDANLSPLALEASCQLAAEVGTPVWFEPVSVAKSRRIVSVAKYITFTSPNEDELIAMANALSPKHTFSPIQKEASTITSLFQQLKPAISILLEKGIKVVILTLGSKGVLLCSKKHFNFLHSICPKRNNNNKRLQEAINLVCPVGRFSGGGGGGVVHFPAVSLAAVVRLTGAGDCLVGGVVASVCGGLDLMQSVAVGIATAKAAVEVETNVPLQFDFDHIAEDARSVYLGAKVVFSQSML | 403 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03060 | 403 | PANTHER | ZGC:136858 | 26 | 379 | - | - | |
| Lssa7g03060 | 403 | Gene3D | - | 26 | 391 | IPR029056 | - | |
| Lssa7g03060 | 403 | ProSitePatterns | pfkB family of carbohydrate kinases signature 1. | 64 | 88 | IPR002173 | GO:0016301(InterPro) | |
| Lssa7g03060 | 403 | CDD | YeiC-kinase-like | 32 | 369 | - | - | |
| Lssa7g03060 | 403 | Pfam | pfkB family carbohydrate kinase | 31 | 290 | IPR011611 | - | |
| Lssa7g03060 | 403 | PRINTS | Ribokinase signature | 33 | 54 | IPR002139 | GO:0016301(InterPro) | |
| Lssa7g03060 | 403 | PRINTS | Ribokinase signature | 203 | 218 | IPR002139 | GO:0016301(InterPro) | |
| Lssa7g03060 | 403 | PRINTS | Ribokinase signature | 263 | 274 | IPR002139 | GO:0016301(InterPro) | |
| Lssa7g03060 | 403 | SUPERFAMILY | Ribokinase-like | 31 | 371 | IPR029056 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03060 | - | - |