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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03086 ATGGCATCGGCAAGCAGATCAGCGTTAATGTCTGGTTTGCGAACAATCGCATCTCAAACCACCGTAATATCAAGAACCCTAGCCCAAAAACATGTACCCATTTCTCCATTTTCTTCATCTACAAGAACACTCCCTCGTGCAGCTTCAAGGATTGTTGGGGCATTGGGAATGGTTGAATCCATGATGCCTCTTCACAGCGCAATTGCATCTGCTCGTCTCAAATCGAGCCTTGCAGTTGATTCCGCCTGCTGGAGCTGGCTTTCACAAGGTCTTGGAACATCATTGTGA 288 47.22 MASASRSALMSGLRTIASQTTVISRTLAQKHVPISPFSSSTRTLPRAASRIVGALGMVESMMPLHSAIASARLKSSLAVDSACWSWLSQGLGTSL 95
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03086 95 PANTHER OS02G0230000 PROTEIN 1 89 IPR043459 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03086 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
127447 Lssa5g03676 Lssa7g03086
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr6:136511005 Lssa7g03086 Lssa-Chr7:163603361 dispersed
Lssa Lssa-Chr7:163603361 Lssa9g02739 Lssa-Chr9:106903922 dispersed
Lssa Lssa-Chr4:402904953 Lssa7g03086 Lssa-Chr7:163603361 transposed
Lssa Lssa-Chr5:245570275 Lssa7g03086 Lssa-Chr7:163603361 transposed
Lssa Lssa-Chr5:266924961 Lssa7g03086 Lssa-Chr7:163603361 wgd
Lssa Lssa-Chr7:163603361 Lssa9g02738 Lssa-Chr9:106880424 wgd