Gene detail

AGRP Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03152	ATGACTCAGATTAGCAGAAAAATGTACAGATTAGACCTAAAAAGAACGATTCTATGGCGTGTAGCTCTTCTCCGGCGATGTGCTAGATCTCTCTGGCACCAAATTCTTGCTTGTTGGATCGGAAAATCTGTCCGGTACCGGCAATTGTTGCACTCCGGTCCTTTGATTCCGACGTCTCGTCGTTCTCCGACAACGACGATCGACCCAGCCACCGTGAGCCACCAGTTTCCGGCGTCCAGCGGCGAAATGTCGTCGTCCTCTGGTGGCTCCGATCACGATCAAGATACTTCTGATTTGGTGACGTTGAAGATTAGTCTTTTGGGTGATCATCATATCGGAAAAACGAGCTTCTTGGCAAAATACGTTGGGAAAGAAAAGAATCAAGAAGAATTAAAAGTTAAAGGCATAAATCAGATGGATAAAACATTGTGTGTTAAAGGAGCCAGGATTTCCTACACCATTTGGGAAGTGGGTTGTGATGCATTTTGTCAAGATGCCGATTTGAAAACATCGATTCCTGCTGCTTGTAAAGACTCGGTAGCATTGTTGTTCATGTTTGATTTAACAAGTCGTTGTACACTTAATAGTGTTATCAATTGGCATCAACAAGCTAGGACTTATAATCAGAGTGCGATTCATGTTATGGTTGGTAGCAAGTTCGACGAATTCGTTCAGCTTCCATTGGATTTACAGTGGACAATTGCAAGTCAGGCAAGAGCATATGCAAAGGCTATAAACGCGACATTGTTCTTCTCGAGTGCATCTTACAATATAAATGTAAATAAAATCTTCAAGTTCGTAACTGCGAAGCTCTTTGACTTGCCATGGACTTTGGAGCGAAATCTTACAATTGGCGAGCCTATTATTGATTTCTGA	876	42.47	MTQISRKMYRLDLKRTILWRVALLRRCARSLWHQILACWIGKSVRYRQLLHSGPLIPTSRRSPTTTIDPATVSHQFPASSGEMSSSSGGSDHDQDTSDLVTLKISLLGDHHIGKTSFLAKYVGKEKNQEELKVKGINQMDKTLCVKGARISYTIWEVGCDAFCQDADLKTSIPAACKDSVALLFMFDLTSRCTLNSVINWHQQARTYNQSAIHVMVGSKFDEFVQLPLDLQWTIASQARAYAKAINATLFFSSASYNINVNKIFKFVTAKLFDLPWTLERNLTIGEPIIDF	291

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03152	291	Gene3D	-	90	280	IPR027417	-
	Lssa7g03152	291	SMART	rab-sub-5	102	274	-	-
	Lssa7g03152	291	PANTHER	-	100	290	-	GO:0003924(PANTHER)\|GO:0005525(PANTHER)
	Lssa7g03152	291	FunFam	Septum-promoting GTP-binding protein 1	92	281	-	-
	Lssa7g03152	291	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	101	283	IPR027417	-
	Lssa7g03152	291	PRINTS	Transforming protein P21 ras signature	102	123	-	-
	Lssa7g03152	291	PRINTS	Transforming protein P21 ras signature	209	222	-	-
	Lssa7g03152	291	PRINTS	Transforming protein P21 ras signature	249	271	-	-
	Lssa7g03152	291	Pfam	Ras family	103	270	IPR001806	GO:0003924(InterPro)\|GO:0005525(InterPro)
	Lssa7g03152	291	ProSiteProfiles	small GTPase Rab1 family profile.	93	291	-	-
	Lssa7g03152	291	MobiDBLite	consensus disorder prediction	57	95	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03152	K07976	Rab family, other

Event-related genes

Select	Gene_1	Gene_2	Event_name
	128079	Lssa7g03152	Lssa9g03905

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr5:8433480	Lssa7g03152	Lssa-Chr7:166861162	transposed
	Lssa	Lssa-Chr7:166861162	Lssa9g03905	Lssa-Chr9:197343449	wgd