Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03203	ATGGTGAAAATAAAATGGGAAAGATACTTGTTTGGTTTTGTTTTCGTTGTGGGCCGAACCGAATTACATCTTAAAATATTAAATCAAACCAACATGAACATGTGTCTATTTTTAAAACTTTATTTGATCATCGGACCTTCGTATGAACACACGGCAAGCTGTTTGAATTTGGGCTTCGAGAAACCCGGGCCAGCCTCCATTGAAGACTTCAAACCGAAGAAGGAAAGCTACGAAGGTAGTGGATGCTTCTCGATCCATTACAATTATCTTGTCATATTATTATTTGGGATCGCATGTAAAACTACAAATATCAAGTGGAAACTGGAAAGAGGAAGGAAAAAACCTAACCAAAAGATGGATTTTGAGTTGAGAAGAGCGAGAGAGAAATTGGAGAAAGAGCAAAAGGATAGAAAAGAGAAGGCGAGGGCAAGATTAGATAAAGAGAGAAAGGCCAAACAAGAAGCTAATCGTCAGCGTGAGGCGATCGAGGCTTCTCAGAGAGCTCGTAGAATCGATGCCATGGAAGCCCAACTTAAGGCAGATCAACAGATGGAAGAAAACATACTCGTCGGAAGAGGAATCTCTTTCAATCGTGTTCTTGAAGCTGTACCATTCGAAGGCTCCGGTGATAAAATCAAACTCCCACCTTCCTGTTTCAACGATTTATCCAGTGAAGGTGCTTTCGACAAAGGCCCCCTCCATTTCCAACTATCAGTACATCACCAAAACAACTCTTCTCCATCAGAAACCATAACAACCCATGCTGGTGTCCTCGAATTCACTGCAGATGAAGGTACTGTTATCATCCCTCCTCACATCTGGAACAACCTATACTCCAAAAAAGACCCAATTACCCCTCTAATCGAAGTCAAATACGTATGGCTTCCAAAAGGAACATACGCAAAGCTTCAATCACAAGAACTCGGATTCTCAGACATACCCAACCACAAAGCAGTCCTTGAAACAACCCTTCGCCAACACGCAACCCTTTCTCAAAACGACATTTTAACAGTCAAACATGGTGTGTTGACTTATCATCTCCATGTCCTCGAGCTCAAACCTTCACCGAGTGTATCCGTTCTTGAAACCGATATAGAAGTCGACATCGTGGGTCCCGATTCACTTCCCGAAAACAACACCCAACATGTTCTAAAGCCACTAACATTTGGAAAACCCGAATCAGGAATCATAAACGAAGGTGATTACATATATTACAAATTCACAATAAACGATGAAATATGGGGGAAAATTTCATCTGGGTATGCTGAAATTGAAGTGAAATTAGATTCAGAAGCGAAAGATTGCGACACCGATCTTTATCTTTCGCGACACCCGCTTTTGTTCCCGAGTACACATCAGCACGGTTGGTCTTCACATGACATGGGTTCAAAAAGTTTGGTTCTCGGGTCAAAAGATCACAATCTGGGTATTGGTGGATATAGTGTAGGTGTATATGGGTTCAAGGGTACCACAAAATATAATGTTATAGTAAACATTCAAGATATTCCCACCACAAATGTAAGTCAACAAGGTCAACAAAGTGTGTCTTCTTCTTCTTCTTCATTGGTGGATACTGTGGAGTGTGGAAATTGTAAGCATTATATACCTTTGAGGACTATAGGGCTTCATGAGGCGTATTGTAGAAGACATAATGTTGTTTGTGAGCATGATGGGTGTGGGGTTGTTCTTAGGGTTGAAGAGGTTAAGAATCATGTGCATTGTGTGAAATGTGGGTTGGCTTTTCATTGTAGAGAGATTGAAAAACATATGAAAGTGTTCCATGAGCCTTTACTTTGTCCTTGTGGGATCACCCTTGAAAAAACACAAATGGTGGAACATCAGGCGTCAGAGTGCGCGCTACGTTTGGTGATATGTAGATTTTGTGGGGATATGGTGGAAGCGGGGACACTGGCGGTGGATGCGCGGGATCGGTTAAAAGGACTTTCAGAGCACGAGAGTCGATGTGGGTCCCGGACTGCCCCGTGTGACTCTTGTGGGCGGGCGGTTATGTTGAAAGAAATGGATATTCATCAAATAGCGGTTCATCAGAAGAATTGA	2058	42.23	MVKIKWERYLFGFVFVVGRTELHLKILNQTNMNMCLFLKLYLIIGPSYEHTASCLNLGFEKPGPASIEDFKPKKESYEGSGCFSIHYNYLVILLFGIACKTTNIKWKLERGRKKPNQKMDFELRRAREKLEKEQKDRKEKARARLDKERKAKQEANRQREAIEASQRARRIDAMEAQLKADQQMEENILVGRGISFNRVLEAVPFEGSGDKIKLPPSCFNDLSSEGAFDKGPLHFQLSVHHQNNSSPSETITTHAGVLEFTADEGTVIIPPHIWNNLYSKKDPITPLIEVKYVWLPKGTYAKLQSQELGFSDIPNHKAVLETTLRQHATLSQNDILTVKHGVLTYHLHVLELKPSPSVSVLETDIEVDIVGPDSLPENNTQHVLKPLTFGKPESGIINEGDYIYYKFTINDEIWGKISSGYAEIEVKLDSEAKDCDTDLYLSRHPLLFPSTHQHGWSSHDMGSKSLVLGSKDHNLGIGGYSVGVYGFKGTTKYNVIVNIQDIPTTNVSQQGQQSVSSSSSSLVDTVECGNCKHYIPLRTIGLHEAYCRRHNVVCEHDGCGVVLRVEEVKNHVHCVKCGLAFHCREIEKHMKVFHEPLLCPCGITLEKTQMVEHQASECALRLVICRFCGDMVEAGTLAVDARDRLKGLSEHESRCGSRTAPCDSCGRAVMLKEMDIHQIAVHQKN	685

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03203	685	PANTHER	UBIQUITIN FUSION DEGRADATON PROTEIN 1	119	656	IPR004854	GO:0006511(InterPro)\|GO:0030433(PANTHER)\|GO:0031593(PANTHER)\|GO:0034098(PANTHER)\|GO:0071712(PANTHER)
	Lssa7g03203	685	Gene3D	Zinc-RING finger domain, C3HC4 (zinc finger)	593	645	IPR013083	-
	Lssa7g03203	685	Gene3D	-	297	370	-	-
	Lssa7g03203	685	Pfam	TRAFD1-XAF1, zinc finger	648	677	IPR049439	-
	Lssa7g03203	685	Gene3D	-	195	295	IPR042299	-
	Lssa7g03203	685	Pfam	Ubiquitin fusion degradation protein UFD1	208	372	IPR004854	GO:0006511(InterPro)
	Lssa7g03203	685	Coils	Coil	116	168	-	-
	Lssa7g03203	685	MobiDBLite	consensus disorder prediction	129	166	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03203	K14016	ubiquitin fusion degradation protein 1