Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03207	ATGAACGGGTCCGTCATCATGTCAGACTCATCTTTGCAGCCGAGTTTGAAGGAGGTGGAGAAGATTATAGGGTATGAATTCAAAAACAAAGGCTTGTTGAAAGAAGCTTTTACTCATTATACTTACAAAGATATCGATTGTTCTGAATCCTATGAACGACTAGAGTACCTTGGCGGCTCGTTTCTGAACCTTATGATTGCCAAAGAACACTATCTCCTGTACCCGGATATGACATCTGGTGAGTTGACTCGGTTGCGTGCTGCCAATATAGACATCGAAGCTTTGGCTCGTGCTGCCTTCAAACATGGCTTACATCGGTTTCTCAGGCACCAGGATCATTTATATGATGAATGGATTCAAGAACTCATAGAAGGAATCAAGGAATACCCATTGCACTCCACTGGTTTGATCCATTCGCCTAAGATCTTTGCAGATATTCTCGAGTCTCTAGTTGGTGTTGTCTATGTTGACACCAATTTATTGGTCGATGCTACATGGGAGGTGGTGATGAACTTGTTACAACCTTTGGTCATACCAGAAAACCTTAACTTAAACCCTGTTACGAGGTTTAATGAAATGTTCCAAAAGATCGGGATAAAATCAGAATATAAAGATTTGTGGGACGATAGAAAGGAAATTGAAATATATGTAGATGAGAAGTTAATTGGGATAGGAAACAACAAGAACAAGAAAACAATCGCAAAGAATAAAGCTGCAGCACAAGCGTACGAAAATCTTGCCAAGCAATTGGCTATGGAAAATGGTGCATTTGTTTATGAACTTTGA	786	39.95	MNGSVIMSDSSLQPSLKEVEKIIGYEFKNKGLLKEAFTHYTYKDIDCSESYERLEYLGGSFLNLMIAKEHYLLYPDMTSGELTRLRAANIDIEALARAAFKHGLHRFLRHQDHLYDEWIQELIEGIKEYPLHSTGLIHSPKIFADILESLVGVVYVDTNLLVDATWEVVMNLLQPLVIPENLNLNPVTRFNEMFQKIGIKSEYKDLWDDRKEIEIYVDEKLIGIGNNKNKKTIAKNKAAAQAYENLAKQLAMENGAFVYEL	261

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03207	261	CDD	RIBOc	32	177	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lssa7g03207	261	SUPERFAMILY	RNase III domain-like	7	178	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lssa7g03207	261	Pfam	Ribonuclease III domain	52	158	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lssa7g03207	261	SUPERFAMILY	dsRNA-binding domain-like	180	248	-	-
	Lssa7g03207	261	Gene3D	-	183	255	-	-
	Lssa7g03207	261	Gene3D	Ribonuclease III domain	10	182	IPR036389	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lssa7g03207	261	SMART	riboneu5	31	182	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lssa7g03207	261	Pfam	Double-stranded RNA binding motif	186	246	IPR014720	-
	Lssa7g03207	261	ProSiteProfiles	Ribonuclease III family domain profile.	16	159	IPR000999	GO:0004525(InterPro)\|GO:0006396(InterPro)
	Lssa7g03207	261	PANTHER	DICER-RELATED	12	251	-	GO:0003723(PANTHER)\|GO:0004525(PANTHER)\|GO:0005634(PANTHER)\|GO:0005737(PANTHER)\|GO:0030422(PANTHER)
	Lssa7g03207	261	FunFam	Endoribonuclease dicer-like 1	11	180	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03207	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr5:275748611	Lssa7g03207	Lssa-Chr7:169914214	dispersed
	Lssa	Lssa-Chr7:169851045	Lssa7g03207	Lssa-Chr7:169914214	dispersed
	Lssa	Lssa-Chr7:169859913	Lssa7g03207	Lssa-Chr7:169914214	dispersed
	Lssa	Lssa-Chr7:169914214	Lssa7g03959	Lssa-Chr7:206784706	dispersed
	Lssa	Lssa-Chr7:169914214	Lssa7g03209	Lssa-Chr7:170028627	proximal