Gene detail

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Species

Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03213	ATGATTAAGCAGATACTAAATAAGCTTCCGAGGAAGCCATCTTCCAAATCCTCACACAATAATGAAGGAAACAACGAAACGGATTTGGTTGCTATGAGTTCGAGTAAAAGCAATTCATCATCTTTGTCTAAATCGAATAATGAAACTCGTAATTCAACTGTTAAGTCAAATCATGGGAAGAAAACAGGTACAATTGCAGCGATTCAAGTGGTGCAGGTATCGGATCATGGTTCTTATGAAGCGTTACCTAGTTTTCGAGTAGTATCAAGTTCAGAGAAACACAATTTATTCATCAAAAAGTTGAATATGTGTTGTGTAGTGTTTGATTTCAGCGATCCGTTGAAGAATTCAAAAGAAAAGGATGTGAAAAAACAGACTCTACTCGAGCTTGTTGATTATGTCTCATCAGTTTCCTCAAAATTCAACGAAGTTACAGTGCAGGAAATCACGAAAATGGTGTCTGCAAATCTGTTTCGATCTCTCCCTGATACTACTACTCATGAAAGTAAACTGCTAGATGTTTACGATCAAGAAGACGATGAATTCAGAATGGATCCTTCATGGCCGCATCTTCAAGTTGTGTATGAATTCCTTCTTAGATTTGTGGCTTCTCCCGAAACAGATCCTAAGCTTACAAAACGATATATAGATCATTCCTTCGTTTTAAGATTGCTTGATCTCTTCGATTCTGAAGATCAAAGAGAACGGGAGTATTTGAAGACAATCATCCACCGGATTTACGGAAAGTTCATGGCACATCGTCCGTTCATCAGGAACGCAATTAACAACATCTTCTACCTTTTCATTTTTGAATCAGAAAAACACAACGGAATAGCTGAATTGCTCGAGATTTTGGGGAGTATAATCAACGGGTTTGCTCTGCCATTGAAGGAAGAACATAAGCTTTTTCTCGCTCATGTCTTAATCCCCCTCCACAAGCCCCGATGTTTATCCACGTATCATCAGCAACTCTCGTATTGTGTTGGTCAGTTCATCGAGAAAGATTTCAAGCTTGCAGACATGGTGATTCGAGGATTACTCAAGTATTGGCCAGTGACTAATAGTTCAAAAGAAGTCATGTATCTTAGCGAATTGGAGGAGATTCTAGAAGCCACCAAGTCGGCGGAGTTTGAACGGTGTATGGTTCCTTTATTCCGGCAGATCGGCCACTGTCTTAATAGCTCTCATTTCCAGGTGGCAGAGCGTGCGTTGTTCATGTGGAACAACGAGCATATAAGGAATCTAATAAGTCAAAATCGGAAAGTGATTTTGCCGATTATCTTTCCGGCATTAGAGAAAAACACACGGTGTCACTGGAATCAAGCCGTTCAAAGTCTGACTGTAAATGTCCGGAAACTATTTTCCGACGCCGATCAGACACTGTTCGAGGAGTGCCAGGTCAGGTACCGGGAAGATGAAACGAAGGAGAAAGAGAGCGTCGCAAAGCGACAATCAAACTGGAGCCGCCTGGATGCCATAGCCGCCGCTAAAGGTTTGACCGGCGATCATTCAGTCGTCTCAAGGTTTGCCTCTTCTCTCACCATCACCGCCACCACTGCAACCACCGTGAAATGA	1575	41.84	MIKQILNKLPRKPSSKSSHNNEGNNETDLVAMSSSKSNSSSLSKSNNETRNSTVKSNHGKKTGTIAAIQVVQVSDHGSYEALPSFRVVSSSEKHNLFIKKLNMCCVVFDFSDPLKNSKEKDVKKQTLLELVDYVSSVSSKFNEVTVQEITKMVSANLFRSLPDTTTHESKLLDVYDQEDDEFRMDPSWPHLQVVYEFLLRFVASPETDPKLTKRYIDHSFVLRLLDLFDSEDQREREYLKTIIHRIYGKFMAHRPFIRNAINNIFYLFIFESEKHNGIAELLEILGSIINGFALPLKEEHKLFLAHVLIPLHKPRCLSTYHQQLSYCVGQFIEKDFKLADMVIRGLLKYWPVTNSSKEVMYLSELEEILEATKSAEFERCMVPLFRQIGHCLNSSHFQVAERALFMWNNEHIRNLISQNRKVILPIIFPALEKNTRCHWNQAVQSLTVNVRKLFSDADQTLFEECQVRYREDETKEKESVAKRQSNWSRLDAIAAAKGLTGDHSVVSRFASSLTITATTATTVK	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03213	524	MobiDBLite	consensus disorder prediction	10	60	-	-
	Lssa7g03213	524	Gene3D	-	90	492	IPR011989	-
	Lssa7g03213	524	FunFam	Serine-threonine protein phosphatase 2A regulatory subunit	89	493	-	-
	Lssa7g03213	524	Pfam	Protein phosphatase 2A regulatory B subunit (B56 family)	82	494	IPR002554	GO:0000159(InterPro)\|GO:0007165(InterPro)\|GO:0019888(InterPro)
	Lssa7g03213	524	MobiDBLite	consensus disorder prediction	1	60	-	-
	Lssa7g03213	524	PIRSF	PP2A-B56	2	522	IPR002554	GO:0000159(InterPro)\|GO:0007165(InterPro)\|GO:0019888(InterPro)
	Lssa7g03213	524	PANTHER	SERINE-THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B	1	495	IPR002554	GO:0000159(InterPro)\|GO:0007165(InterPro)\|GO:0019888(InterPro)
	Lssa7g03213	524	SUPERFAMILY	ARM repeat	94	477	IPR016024	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03213	K11584	serine/threonine-protein phosphatase 2A regulatory subunit B'

Event-related genes

Select	Gene_1	Gene_2	Event_name
	128087	Lssa7g03213	Lssa9g03862

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr7:170283309	Lssa8g05202	Lssa-Chr8:283281993	dispersed
	Lssa	Lssa-Chr7:170283309	Lssa9g03862	Lssa-Chr9:194859011	wgd