AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03227 ATGAAGTTCGGCAGTATTTCTTTCCTTTCCTATTTTAGTTCGTTACAACACGCATGTGGGTACTGGATTAATCAAGTATCTTCAGAAGCTCATGAGATTATCGCTTTGATTTGGCCGATCGAGTTCAATCAGGAGTTAAAGCGTGGTTTACATGAGGAGATACTTCTATCCTTTAACCAGCTTCCAAATTGGTTTTTGTTGCAAATTCTTATACCAGACATTAATCGTTGCTTTCTTTTTCCTCACAGGGATCTTCAGTCTTATCTTTCCGATCTTACCCTTTTCTTAGCCCCTGATAGTAAGACCTTTTATGTATTGGTGGATAATCGACCATGGCTGGAAGATCTAGCTTCAAGACCTGCACATCTATGGCAGTTAATGGTTACCAAGTCAAGGATGTCCCCTTTTGCAAACACAAGGGGCAGAAAGGGAAAGAAAAAGACCAAAGAGTTCATCAACCAGAAGGTGAATTCCAAACCTTCAACCCGGACCCAAAACTTGAAAAAATGGTTTTCAGTAGTTGATGCTGCAGCATTATCAAAAAAGAGAGCTTTATTACCTGTAAAGAAACTCAGAAGCTCCCTTCTTGCAAATAGCAAATTACACAGAACTTTATACGGATTCATTGTCTTTCAAGTTGAGTGGAAAGATGTTCGTGGTATCAACTACTTAAATGAACTTCAGACTGATACATCTCTTGCTATAGAGGCTAAATACATGAAAAGATGGGAATTCGATAGCATAGCTCAATCAGTTAAATGCATAAATTCATGGTTTCCAGGAACACCTAATGAACAATCAATCTTGGAAGAGCATCTCAACTCTATGCTAGGAGATGAGTTTTATGACGCCCCGAAAGAATTCCAAGAATACCCTTGTGCAAAAGATGATGAAAAAACCTTACAAGGGGAAAATCTTGATAAAAAGGTAGAAACTTTAGAAAATGAAACAAGTGAAGAAATCCATACCCCTCCACCTTATAAGAGAAGAAAACTAACAAATTCAGCAGGAATCGATGTCGAGGTGAATATTTACACAGACATAAGCAACGGAAGAACCGTAATTACCAAAATGCCCTCGTTAACCGATTGTGATGAAACAGCTGAACCCAGTGAGTCAAAAGACGTGTTGCTTTTATTCAAGTTTAACAACCATGATCTCCCTTTTGAATTAAAGGAAATAATCGTATCTGATTTGAGATTATTGACTCTTCTAGAAGCTGGACTTCCATCTTGGGTAATTTTCTCCCAATCTTACCCTGTTTTTTGCCATATTTATCGACCATGGATGTGCCCTTTAGCAAGAGCTCTATATGTCATCATCTCCATTGTTACAGTTGTCATTGGTTTCTATGATCTTTACAAAAATGTCCCTGTGCTTAAAGCAACTGCTTCACGTTTATGTGGGCCACTTTTTGATTGGATTGAAACGTGGGAAATGGTATCGAGGATTAAGTATTTAGGGACGATGCTTTTTTTGCATAATTCCGAAAAAGCCCTTGTGTGGTTGTTGATGATGACAAGGACTGTGAGGTCATTTGTTTCGATTGTTACACAACCTTTATCTGGTCCGTTTCTTGATTTTCTTGAAATTCTTCTTCCGTTTTGGAATTTGTTTGTGCAATTTGGACAATATTTGTGCTCGTTTTTGGGGATTTTGATGGAAAGTTCGTGGGATTTGGTGGAAAATCTAATTGAAGCTGTTATGCTTCCTGTGTGGTTCGTATCATCGGTTGTTTGGACAATTGTAATGAGTATTATGTACCCAATATTTTGGTTCATTTGGGGGATACTTTATGCACCAATAAGTCTCATTCTTGGTGTATCCAATTTTGTGGGATTTATGTACAACCAAATATACGATTTATTTGGAGAAATATGGATTCTCGTGAGTGATATATTTAAATTAGCTTCAAATGCTGAGTCAGCAGCCCACACTTACGAGGTTTCCATTTGGAGATCCCTTTGGAACGACTTATTTTCCCAGGTTTTCCGTGCTCTTCGGAGTATTTTAAACGGGTTTGTTGCGTTCTTTGCAGCTTGCAATAGACATCGATTGAGCATATATAATCATTTACATGAGTTGATTCGAAGAGTTAATCAGCCAAGTGAGAGATTTGAGGGTGTGAATGTGAATTCTAGCCATGAATCACAAGGAACTCGGTTACTTGGGGGAGAAAAACAGGATAGGAGAAAGTGGAAGAAGAGTTAG 2211 38.17 MKFGSISFLSYFSSLQHACGYWINQVSSEAHEIIALIWPIEFNQELKRGLHEEILLSFNQLPNWFLLQILIPDINRCFLFPHRDLQSYLSDLTLFLAPDSKTFYVLVDNRPWLEDLASRPAHLWQLMVTKSRMSPFANTRGRKGKKKTKEFINQKVNSKPSTRTQNLKKWFSVVDAAALSKKRALLPVKKLRSSLLANSKLHRTLYGFIVFQVEWKDVRGINYLNELQTDTSLAIEAKYMKRWEFDSIAQSVKCINSWFPGTPNEQSILEEHLNSMLGDEFYDAPKEFQEYPCAKDDEKTLQGENLDKKVETLENETSEEIHTPPPYKRRKLTNSAGIDVEVNIYTDISNGRTVITKMPSLTDCDETAEPSESKDVLLLFKFNNHDLPFELKEIIVSDLRLLTLLEAGLPSWVIFSQSYPVFCHIYRPWMCPLARALYVIISIVTVVIGFYDLYKNVPVLKATASRLCGPLFDWIETWEMVSRIKYLGTMLFLHNSEKALVWLLMMTRTVRSFVSIVTQPLSGPFLDFLEILLPFWNLFVQFGQYLCSFLGILMESSWDLVENLIEAVMLPVWFVSSVVWTIVMSIMYPIFWFIWGILYAPISLILGVSNFVGFMYNQIYDLFGEIWILVSDIFKLASNAESAAHTYEVSIWRSLWNDLFSQVFRALRSILNGFVAFFAACNRHRLSIYNHLHELIRRVNQPSERFEGVNVNSSHESQGTRLLGGEKQDRRKWKKS 736
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03227 736 MobiDBLite consensus disorder prediction 708 736 - -
Lssa7g03227 736 PANTHER OS05G0597400 PROTEIN 81 731 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03227 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
128089 Lssa7g03227 Lssa9g03857
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr7:171565160 Lssa9g03857 Lssa-Chr9:194657694 dispersed
Lssa Lssa-Chr7:171565160 Lssa5g03832 Lssa-Chr5:275270100 transposed