Gene detail

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Species

Gene ID

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Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03231	ATGAAATATCCCATTACCACTAACAAAAGCCCAATTGGTTGGGCTCTAATTCTACACTTGTATGCTTTCCTGATCTCCACGCAAAGACAACCTTCTACCAACACCACCGGCACCCGTCGGGGAACCACTGTGCTCCTCCAGATGGATGTACTCTTCAATTCAATCGACGTCCGGGATTTGTTATCGTCACATGATCTAGACGACTCTTCACCGCTCTCCGCCCCCGATCTCCGCCTCCTCATCGACCGTCTCCAAGTCCGTTCACTCGACATTAAGTCCAAAGTCCACAATTACATACTCGCTAACAATGATGACTTCTCTGCCCTATTCTCTCGCTGCTCCGACGCTGTTATTAATTCCGAGCAACTATCCGATCAAGTATCTAACCTTGTTGGTCTGTTATCATCGAATCTTCAACCGATCGATCTGAAAATCAAAGAAACAGTCGATGAGATTAGGAGGAAACGTGTTGAATCGAAAGAGAAGAAGGAAGCGCTAGATTTAGTTAAGGTAGTGTTGAAATTGAGCCAAGAGTTGAGTGTTGTGGAGAGTGATTTGATGGCGGGAAAGGTCGTTGAGGCTGCAGAGGCTCTTACAGACTTGAAAGTGGCTTTACGAGTTAGAGATAATGTGGAGGATCTCCGGGAAGAAAGAGAGCCATTGGTATTTGGTTTGTTAAGGAAGAAATGGACAGATTGCTTCGAAGAGATACAAAATGTGCTAGTGAAGTTCATGGAGAATGCAGTGAGATTCGATCAGCAGTCCAATGTAGTTTATGTCAAAAATAGAATGGCTATGAATGACAATCAAGGGGTTGAGCTTTGTACTGTTGTGAAAGCAATGCATGTAGTTGGTATTCTAGATTATGGGCTTGCAAAAGTAGCAGACATGATGACCAGACATGTGATAGCACCTGCAGTGCGCTCTGGTTCTCATAGTTTTTCTGTAGAAGAAAAAAGACTAGATTCAGGATATATAGCTGAGGTAGTTTTGAGAATAACCCCACCTTCTGATTCTCAGATTGAGAACATGGATGCTGAAACTATCTATTCTGGAATTAATGTTGTGATTCAATTCATTTTCAACTTTATCTGCTTTCAAGATTCTTCCTGGATGCGATACTTTGGAAGATTAACATGGCCCCGAATGTCAGAATTGATTATCTCTAATTTCCTTTCCAAGATTGTTCCCACTGATGCTTCCAAACTTGCTGACTTTCAAACAACAAGACAACTCACATCTGACTTTGAGGCATCTCTTAAACAAGTTATGTTCATCTCCCCTGGGAAAGATGAAAGGTTGACTAATTTTGCTGACAATGTTGAAGTTCACTTTGCAATGAGGAAAAAGATTGAGATTTTAGCATCAGCAAGAGACCTTCTTCTACATTCAGATTTTAATCTTCCTAAAGACTATTCAAGGAAAAATACAGAGCTTAAAAATGGTGGAAACACAGACTTACTTTTTTCCTCTGAAAAATGTGTCATTTCTGAAGCAGCTTCTCGTTTAATGGAAGTTGTCCATGAAACACTAAAGGATGTTTGTTTATCATCTGCAACAGTGGCTTTAGAATTCTACCATGCTGCTAGGGATGCTCTACTTCTTTATGAAGCTGTTATTCCAGTCAAGTTAGAAAGACAGCTGGATGGAATCAACCAGGTTGCTGTTCTTATTCATAATGATTGTCTTTATCTTTCACAAGAGATTCTTGGCCTTGCTTTTGAGTATAAGTCGGATTTCCCAATTTCCATGAAGGGAGCTGTGTTTATTGATTTGGGTGTAAGATACAAGATTATGGCAGAAGAGATATTACAAAGACAGATACAGCTTGTTAAACATAATTTAATGGAGGCGATTGATGGGGCTGATGGATTTCAAAATACGCATCAACCAAAAAGATGTGAATCTGCAAAATTTAGTATTGATCAGGTGGCTTTTATACTGGAGAAAGTTCACATAATATGGGAGCCACTTTTGCTTCCTTTGACATACAAAGGAAGTATGTGTAGTGTTGTGGAGGCTGTTTGTTCTAGAATGACAAAAGATATACTCATGTTAGATGACATTGCAGCTGAAGAAACATTACAGCTTCAAAGGTTGATTCATATGCTGCTGGAAAACCTTTCTTCTTTAATGGAATCTTTGATTGCCATCAATCAAACAACAAAGCCACAAGAGAAGTCATCAGGCTCTATTAATGATCTAATTCCATCACTCCCTAGACTACGGATATTAGCAGATATGTTGGACATGCCTTTGAAGTCCATTACTGCATCATGGGAAAGTGGTGAGCTGGCAAAGTGTGGTTATACTTCATCTGAGATGAGGGATTTTATCAGAGCCATATTTACGGATTCGCCCCTACGGAAAGAATGCTTGTGGAGAATTGAAAATATCACATTTTAG	2406	39.94	MKYPITTNKSPIGWALILHLYAFLISTQRQPSTNTTGTRRGTTVLLQMDVLFNSIDVRDLLSSHDLDDSSPLSAPDLRLLIDRLQVRSLDIKSKVHNYILANNDDFSALFSRCSDAVINSEQLSDQVSNLVGLLSSNLQPIDLKIKETVDEIRRKRVESKEKKEALDLVKVVLKLSQELSVVESDLMAGKVVEAAEALTDLKVALRVRDNVEDLREEREPLVFGLLRKKWTDCFEEIQNVLVKFMENAVRFDQQSNVVYVKNRMAMNDNQGVELCTVVKAMHVVGILDYGLAKVADMMTRHVIAPAVRSGSHSFSVEEKRLDSGYIAEVVLRITPPSDSQIENMDAETIYSGINVVIQFIFNFICFQDSSWMRYFGRLTWPRMSELIISNFLSKIVPTDASKLADFQTTRQLTSDFEASLKQVMFISPGKDERLTNFADNVEVHFAMRKKIEILASARDLLLHSDFNLPKDYSRKNTELKNGGNTDLLFSSEKCVISEAASRLMEVVHETLKDVCLSSATVALEFYHAARDALLLYEAVIPVKLERQLDGINQVAVLIHNDCLYLSQEILGLAFEYKSDFPISMKGAVFIDLGVRYKIMAEEILQRQIQLVKHNLMEAIDGADGFQNTHQPKRCESAKFSIDQVAFILEKVHIIWEPLLLPLTYKGSMCSVVEAVCSRMTKDILMLDDIAAEETLQLQRLIHMLLENLSSLMESLIAINQTTKPQEKSSGSINDLIPSLPRLRILADMLDMPLKSITASWESGELAKCGYTSSEMRDFIRAIFTDSPLRKECLWRIENITF	801

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03231	801	Pfam	ZW10 C-terminal helical domain	640	796	-	-
	Lssa7g03231	801	Pfam	Centromere-kinetochore protein zw10, middle domain	226	461	IPR048344	-
	Lssa7g03231	801	Pfam	Centromere-kinetochore protein zw10, C-terminal	489	617	IPR048343	-
	Lssa7g03231	801	PANTHER	CENTROMERE-KINETOCHORE PROTEIN ZW10	51	798	-	GO:0006888(PANTHER)\|GO:0007094(PANTHER)\|GO:1990423(PANTHER)
	Lssa7g03231	801	Pfam	Centromere-kinetochore Zw10 N-terminal	84	178	IPR009361	GO:0000278(InterPro)\|GO:0000775(InterPro)\|GO:0005634(InterPro)
	Lssa7g03231	801	Gene3D	-	594	800	IPR046362	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03231	K11578	protein transport protein DSL1/ZW10