AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03233 ATGAGGAAGCTCTACAACCACAATAAAGGCAAAATCCACCCATCACCACCGCCGTCCGCCACCGCCGATCACTTATCCTTGCTACCGATCGCCATAGCCACTCTCGCCGCCGCCCTTGCACCAGAAGACAAAGAAGTATTGGCATACCTTCTCTCCTGCTCTGTAACCACCACCACCACCAACAACAACAACAACACCAACAATAACTTCTCCGGCAACAGAAAACCCACCAGTAAAATTCACGGCGGAGATGGTGGCGGAGGCGGAGGCGGAAGCCATATTCCGCAATTCAACTGCGACTGTTTTACATGCTACACAAGTTACTGGGTTCGATGGGATGCGTCGCCAAATCGACAACTGATTCATGAAATCATTGATGCTTACGAAGATGGGTTGATTCATAACAAGAAGAGTGGGAAGAACAAGAAAGAAAGAAGAAAGAACAAAGTTTCTTCATCTTCCCCCAACGCGCCGATTATCGCTTCGGAGAAGGTTCCTCACGCGCCGCCGCAAGTCGAGGAAAAATTGATTAACAGTGATTATGATGATGATGGAGATGAAGAGGAATTGATGATTGGGTCATCGTCGGAGAAAGGATCAGTGAGAAAATTTGTAAGTTTCATAGGAGATAGGATTTGGGGTGTTTGGGGGATTTGA 657 47.49 MRKLYNHNKGKIHPSPPPSATADHLSLLPIAIATLAAALAPEDKEVLAYLLSCSVTTTTTNNNNNTNNNFSGNRKPTSKIHGGDGGGGGGGSHIPQFNCDCFTCYTSYWVRWDASPNRQLIHEIIDAYEDGLIHNKKSGKNKKERRKNKVSSSSPNAPIIASEKVPHAPPQVEEKLINSDYDDDGDEEELMIGSSSEKGSVRKFVSFIGDRIWGVWGI 218
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03233 218 MobiDBLite consensus disorder prediction 1 20 - -
Lssa7g03233 218 MobiDBLite consensus disorder prediction 58 76 - -
Lssa7g03233 218 PANTHER F12F1.11-RELATED 1 217 - -
Lssa7g03233 218 MobiDBLite consensus disorder prediction 136 173 - -
Lssa7g03233 218 MobiDBLite consensus disorder prediction 58 88 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03233 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr5:274709330 Lssa7g03233 Lssa-Chr7:171798848 dispersed
Lssa Lssa-Chr7:18143790 Lssa7g03233 Lssa-Chr7:171798848 wgd