Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03289 | ATGGGTAAGTTCTTGAGTGTTCTTTTTTGCATCTTGATATCGAATCTGGCTGTTTCAAGTGCTCAAAATTGCAATACTTATGCCTTTCGAAACAACGCTATCTACGCTACTTGTGTTTCGTTACCTGTTTTGGACTCGCATCTCCACTGGAACTACCTCACCAACGGCACCGTCGACTTGGCTTTCCGGCACACCGGAGCCACCACATCTCAATGGGTTGCTTGGGCGCTTAATATCGGTGGGTCGGGTATGATTGGGGCTCAAGCGCTTGTTGCTGTTACAAGCCCAAACGGGTCGGTTCAAGCTTACACTTCTGCAGTTTCTAGTTATGGAACGAGTCTACAACCGAGCACTTTGAGCTTCGAGGTGCCGAGGATTACGGCGGAGAGAGTTAACGACGTGGTGGTGATTTACGCGACTATAGTGTTGCCTAATGGAGGAACGGGATTTAATCAGGTATGGCAAGTGGGTCCTGTCGATAATGGAGTTCCGGGTATTCATGCACTCGGTAGTGATAATCGGGGTTCTGTCGGAAGGGTTGATTTTATCTCCGGTCAGACTACTTCCGGCGGTCGTGTTGGTGGGTCGCTAGTGCGCCGGAGAAACACTCATGGAGTATTGAACGCTGTTAGTTGGGGAGTAATGATGCCCATGGGAGCAATGACAGCAAGATATTTGAAGGTGTTCAAAGTCGGTAATCCAGCCTGGTTTTACATCCACGCCGCTTGCCAAACTTCAGCCTACATCGTCGGTGTCGCCGGATGGGCCACCGGACTCAAACTCGGCGGCGACTCTACCGGAATCACATTTGAATCTCACCGGAACATCGGGATCATCCTCTTTTCACTCGGAACACTTCAGGTTTTTGCTCTACTGTTGAGGCCTAAACCCGACAACAAATACAGAATATACTGGAACGTTTACCACCATGGCCTTGGATACGCTGTGATTGCTTTGAGCATTGTCAATGTCTACAAGGGGCTTGATATCTTGGACCCTGAGAAGAAGTGGAAGAACGCATACACAGGAATACTTATTGGTTTGGGGGTTGTTGCAGTTCTTTTGGAAGCTTTCACATGGTTCATCGTCTTGAAGAGGAAGAAGGAAGACCAAAGGACACATGCAGGAGCTAATGGATATGGTCAATCAGTGTAG | 1155 | 48.57 | MGKFLSVLFCILISNLAVSSAQNCNTYAFRNNAIYATCVSLPVLDSHLHWNYLTNGTVDLAFRHTGATTSQWVAWALNIGGSGMIGAQALVAVTSPNGSVQAYTSAVSSYGTSLQPSTLSFEVPRITAERVNDVVVIYATIVLPNGGTGFNQVWQVGPVDNGVPGIHALGSDNRGSVGRVDFISGQTTSGGRVGGSLVRRRNTHGVLNAVSWGVMMPMGAMTARYLKVFKVGNPAWFYIHAACQTSAYIVGVAGWATGLKLGGDSTGITFESHRNIGIILFSLGTLQVFALLLRPKPDNKYRIYWNVYHHGLGYAVIALSIVNVYKGLDILDPEKKWKNAYTGILIGLGVVAVLLEAFTWFIVLKRKKEDQRTHAGANGYGQSV | 384 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03289 | 384 | CDD | DOMON-CIL1-like | 35 | 184 | IPR045265 | - | |
| Lssa7g03289 | 384 | FunFam | Cytochrome b561 and DOMON domain-containing protein | 182 | 372 | - | - | |
| Lssa7g03289 | 384 | CDD | Cyt-b561-FRRS1-like | 180 | 357 | - | - | |
| Lssa7g03289 | 384 | ProSiteProfiles | Cytochrome b561 domain profile. | 163 | 364 | IPR006593 | - | |
| Lssa7g03289 | 384 | PIRSF | UCP037471 | 1 | 383 | IPR017214 | - | |
| Lssa7g03289 | 384 | PANTHER | CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN | 7 | 368 | - | - | |
| Lssa7g03289 | 384 | Gene3D | - | 188 | 374 | - | - | |
| Lssa7g03289 | 384 | Pfam | Eukaryotic cytochrome b561 | 204 | 328 | IPR006593 | - | |
| Lssa7g03289 | 384 | Pfam | Protein of unknown function (DUF568) | 84 | 182 | IPR045265 | - | |
| Lssa7g03289 | 384 | ProSiteProfiles | DOMON domain profile. | 44 | 157 | IPR005018 | - | |
| Lssa7g03289 | 384 | SMART | 561-7 | 203 | 328 | IPR006593 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03289 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 127491 | Lssa5g03805 | Lssa7g03289 | |
| 128091 | Lssa7g03289 | Lssa9g03827 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr7:174983929 | Lssa9g03827 | Lssa-Chr9:191499227 | dispersed | |
| Lssa | Lssa-Chr5:273871200 | Lssa7g03289 | Lssa-Chr7:174983929 | wgd | |
| Lssa | Lssa-Chr7:174983929 | Lssa9g03819 | Lssa-Chr9:191346116 | wgd |