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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03292 ATGTTCAGCTACATCCCGAGTGAAGAACACAGTATAACAAGATGGAGACTAGTAGTGATAACAATTTTAAATCAAAGAGAATTAAGTGTGGATACTGAACAAGTTAAAGAAGAATTGTCAAAGAAAGGATACACTCACCTTGTCATTCAAATGGGTCGTGGATCCTACATCCCGAAAAAGTCTAGTGGTGAAGATGGATCACTGGTTGTTGATTACTTCACCTTTTCTTCAAGCATTGCAGACTATTTAACATCAGCATCTCTTGTTATAAGCCATGCAGGTTCAGGGAGCATATTTGAGACATTAAGGCTAAGGAAACCTTTAATAGTGGTAGTGAATGAAGACCTAATGGACAACCATCAAAGTGAGTTAGCAGAAGAATTAGCAGAAAGGAAACATTTATTTTGTGCTCACCCTCAAACACTCTACCAAGTCATTCAATCATTGGAATTGGAATCCATCATTCCATACCACCCAGGTGATGCCACTCCTGTCGCTAAACTAATCAATCGGCATCTGGGTTTTCCTGCTGATTGA 537 39.11 MFSYIPSEEHSITRWRLVVITILNQRELSVDTEQVKEELSKKGYTHLVIQMGRGSYIPKKSSGEDGSLVVDYFTFSSSIADYLTSASLVISHAGSGSIFETLRLRKPLIVVVNEDLMDNHQSELAEELAERKHLFCAHPQTLYQVIQSLELESIIPYHPGDATPVAKLINRHLGFPAD 178
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03292 178 SUPERFAMILY UDP-Glycosyltransferase-glycogen phosphorylase 45 149 - -
Lssa7g03292 178 Gene3D Glycogen Phosphorylase B; 26 173 - -
Lssa7g03292 178 PANTHER UDP-N-ACETYLGLUCOSAMINE TRANSFERASE SUBUNIT ALG13 29 177 IPR052474 GO:0006488(PANTHER)|GO:0043541(PANTHER)
Lssa7g03292 178 Pfam Glycosyltransferase family 28 C-terminal domain 33 157 IPR007235 GO:0016758(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03292 K07432 beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]