Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03357 | ATGGCGTCGCTGGTGCCCGTCGACGATAACTCCAATACGAAATCAGAGGAGGGAACAATGGCGTTTCACAAGAAGCGGGCTCGGCGCGTGAGCTTTGCAGAGAACACATCTGTTCACATATTTGACCGTGATGAAGACTCAGGAACTCCATTGGAGCCTAAGCCTCCTAGTTCTCCATCAGATGAATTAGGTTCGGGTGAGCTCAATCATGAACGGGGCCAGTTGTTCTGGAATGTAGATGAAGATGATAATGATAACAATAACGAAGATGATGACATGGATGAGCCCGGATCAAGGAGTCCGTTTTTGCGGTTTATTGGGTCTCCGTCCTCCGGTGGAAGTACAATTGGCTCTGCTAACTCCAACGACGAAGATAATTTTTTTGGTCCTGTATCAGCAAATTTTATCAGACGAGATTTACTGGACTCTTCAGCTTCAGATGCAAATCATGATCAAACTATGGATTCAACAGCCTTTTCAATGCATTTTCGTAGCATTGCTAGGTCAGACTCAGAAGTGGAATTGAAAACCTCAACTGGGGTCCACCTTTCCTTTGATGAGAAAACCCCAACTCATGATTCTGTTCCCAATAACACAGGAAATTCAATGTTAATGACACTAGCTAAGAAGCCAGATTATCGACCTTCTTTATCCACCTCCAAATTAAGCACTGCATCTGAGTCGAATGATATGAGTATTGTTGGAGAATATCACTATAAGTATGACTATGGAGAACTATCTCCTACATTGGATGCACTCATGGCAGACCCTTCTGGTGTTTCTATCTTGAAATCACCAAGAAATGTTGAAGCAACCATGGAAAATGGGGATAACCTCATGGATTTGAGTTGTAATGAAGATAATGATTTACAAGGGATTAGTGGTCATGAGTTGGTCAATGTTGATGCATTTCAGATAAAGTCAAACTTAGGCTTCTCTACAATTGGTCAAGGCAATCCTAGTCCTAAAACCACAATTTATATAAATGATGTTATTGGAAAGGAACATAAATCTCCTTTTATAGATGATGTTATTCCATCTAAATCACCAATGTATGTGACTCCTTCTCATAATCATTCAAGTGTTTTTGTAAGAACAGAAGATCAAGAACATGTTTTGAGTATTCAATCCATGCAAAAAAGCATTTCCAAACTCAAGATGCTTAAAGCTTCTCCCTTTTCTGCTGCTTTGAGTGCTAAACTTGAAGATTCAATCATCAAATCTGTCACCAGACCCTCTAAGATGACTCCTTTGAATGCTTTGTTGGAGAAAAACGACAAAAGTCCTTTACTTAATTCTATAAAAGACAGTGGTCATTTATCATCTGATGTTCAGAAAAAGAGAGCAAGAGAAAGTTCAACAAACATGGATGATATTAGGTTTGAGACACCAAATAATATTGTCCCTGTGACTCGTTTGCAAAAGATTGTTGAAATTGCATCACCATTGTTGATACCACATGAAAGCACACACTCTAAAAACACAACTGTTTTGCCTCAAAGTTTGGATTTTTCTTCACAGAAAAGGTTAAAGGTTGTAAATACAACAGAATTTAGAAGCAGCCCCTTGAGGATAGAAAAATCTGGTTCATTAGTTTCTTCCACTCAAGATGAAATGGTGGATATTAGGGAGGTTTCTCTTCATGAGGTTTGTTGTGACTCAAAAACTAAAGATAACCCTACAATCTTATTGAAAAATGAAGAACATGAGAAGTTTGAAGATAAGTTTATGGGAAGTGACATTGTTCTTGAAGAGATGAAAGGAACTTCTCCTGTTTTTGATGAAGGGACAGATAAACAATCTTGGAAGAAGAATTTGCATGATCAGTTTTGTGAAAGCCCTTCAAATAAACAGCCATGCAATAACAATTCACTGCAAGATGAAGATATGATGGTTGAGATAACTGCTACAACTCACACAAGTCCAAAAGCTCATGTAGACCCTGAAATCTTAAATGGAAATGAAATATCAACAATTGTGCAAAAATTAAACAATCCGAATGAGATAAAGACAATGGTTTCTATTGAAATGAAGAAACTTTTATCTCAATCTGTTGATAAGTTTAATTTGCATGTGATTGATCGTTTATCAGACATTGTGGATCAACTTTTAATGTCAAAAACATATCAGCTTCTCTCTGATGAAATCCAGTCTCAGAAAAGTGTAGATATCAGCAAAAAACTACAACATAAAAGAGCCTCAGAAATAAAATTGCTCTTGTGCAAATTTGTACATGAGAAAGCAAAGTTGCAGTTAATGCAAGTGAAACAAGAGATGTTACTGAAAAGGGTAAAATCACTTGCATCTGGAATATCGGAGTCTGAAGAATTAAAGTCAAACTTCCCGCCAAAAAAACTTTCAAGTGAGTCAATGTCAGTCAAAATGAAGGACATTCAAGAGAGCCAAATTGAGAGTGACAAAGTGTCTTCAACAAGACTGGAATTAAATCATATTGACCAAAAAATTGAAAGTTTGACCAAATCTTTTCACAAGTCATGTAAGATGAAAGAAGAACTGAGCTCCCTTGATACCATCACATTTGTTAATAATCATTTGAGGAAGCAAGCATGCTGCCAGATCATACGAAAGGATGTTCAGCTTTGGGTTGTAGACAATCTGAAGAATAGGAACGGTTGCCACAGTGTTGATCTCAATTATCTTGACTTAATGACTCAAAGGTTATCACTAAATGCTGGTCGAGTCCCGAGTGTTTCCATTTCTTATGAATTGAATGATGTAAATATTAGCAAGATCTTCAAAGATATGGAAGCTTGCACTGCATTTAGATTTGTATTTAATGGTGGAGCAACACAGAAGCATGTTGATGGGACAAACTTGGCAAAAGAAACTCAAGTGACTGGTGCCCTTTTTGGTAATTTATTAGATGTAATGGAAGAAATACAACATTCAAGAATACAGCTTAAAAACCTAATTTCTACAAGATTTCGCACACCCTTAGCGGATCAACTTGACCTAGAGCTCTGTTTCTTTAATCCAAAACATCGCATGAAGGCAACAGTCACTTTAAACTTTTCATGTTTAAAAAGGGGTATATATCCATCCGAGATCATTCCATATCAAATTCACATTCCAGCCAATCAACAATCAAAATCCTCACCAATACTTGCGGATGAGATTACAGCAACACTTAAAAATCTTAAAACGGGATTTTTAAGGATTCAACGGGTATGCAGTTGCATTTCCAACAAGGTAAATACTAAATTATAG | 3228 | 37.02 | MASLVPVDDNSNTKSEEGTMAFHKKRARRVSFAENTSVHIFDRDEDSGTPLEPKPPSSPSDELGSGELNHERGQLFWNVDEDDNDNNNEDDDMDEPGSRSPFLRFIGSPSSGGSTIGSANSNDEDNFFGPVSANFIRRDLLDSSASDANHDQTMDSTAFSMHFRSIARSDSEVELKTSTGVHLSFDEKTPTHDSVPNNTGNSMLMTLAKKPDYRPSLSTSKLSTASESNDMSIVGEYHYKYDYGELSPTLDALMADPSGVSILKSPRNVEATMENGDNLMDLSCNEDNDLQGISGHELVNVDAFQIKSNLGFSTIGQGNPSPKTTIYINDVIGKEHKSPFIDDVIPSKSPMYVTPSHNHSSVFVRTEDQEHVLSIQSMQKSISKLKMLKASPFSAALSAKLEDSIIKSVTRPSKMTPLNALLEKNDKSPLLNSIKDSGHLSSDVQKKRARESSTNMDDIRFETPNNIVPVTRLQKIVEIASPLLIPHESTHSKNTTVLPQSLDFSSQKRLKVVNTTEFRSSPLRIEKSGSLVSSTQDEMVDIREVSLHEVCCDSKTKDNPTILLKNEEHEKFEDKFMGSDIVLEEMKGTSPVFDEGTDKQSWKKNLHDQFCESPSNKQPCNNNSLQDEDMMVEITATTHTSPKAHVDPEILNGNEISTIVQKLNNPNEIKTMVSIEMKKLLSQSVDKFNLHVIDRLSDIVDQLLMSKTYQLLSDEIQSQKSVDISKKLQHKRASEIKLLLCKFVHEKAKLQLMQVKQEMLLKRVKSLASGISESEELKSNFPPKKLSSESMSVKMKDIQESQIESDKVSSTRLELNHIDQKIESLTKSFHKSCKMKEELSSLDTITFVNNHLRKQACCQIIRKDVQLWVVDNLKNRNGCHSVDLNYLDLMTQRLSLNAGRVPSVSISYELNDVNISKIFKDMEACTAFRFVFNGGATQKHVDGTNLAKETQVTGALFGNLLDVMEEIQHSRIQLKNLISTRFRTPLADQLDLELCFFNPKHRMKATVTLNFSCLKRGIYPSEIIPYQIHIPANQQSKSSPILADEITATLKNLKTGFLRIQRVCSCISNKVNTKL | 1075 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03357 | 1075 | MobiDBLite | consensus disorder prediction | 104 | 123 | - | - | |
| Lssa7g03357 | 1075 | MobiDBLite | consensus disorder prediction | 440 | 457 | - | - | |
| Lssa7g03357 | 1075 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
| Lssa7g03357 | 1075 | MobiDBLite | consensus disorder prediction | 1 | 123 | - | - | |
| Lssa7g03357 | 1075 | PANTHER | OS06G0608100 PROTEIN | 302 | 619 | - | - | |
| Lssa7g03357 | 1075 | Pfam | Knl1 RWD C-terminal domain | 812 | 963 | IPR040850 | - | |
| Lssa7g03357 | 1075 | MobiDBLite | consensus disorder prediction | 18 | 50 | - | - | |
| Lssa7g03357 | 1075 | MobiDBLite | consensus disorder prediction | 429 | 457 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03357 | - | - |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 128101 | Lssa7g03357 | Lssa9g03756 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr7:177753396 | Lssa9g03756 | Lssa-Chr9:187749562 | wgd |