AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03357 ATGGCGTCGCTGGTGCCCGTCGACGATAACTCCAATACGAAATCAGAGGAGGGAACAATGGCGTTTCACAAGAAGCGGGCTCGGCGCGTGAGCTTTGCAGAGAACACATCTGTTCACATATTTGACCGTGATGAAGACTCAGGAACTCCATTGGAGCCTAAGCCTCCTAGTTCTCCATCAGATGAATTAGGTTCGGGTGAGCTCAATCATGAACGGGGCCAGTTGTTCTGGAATGTAGATGAAGATGATAATGATAACAATAACGAAGATGATGACATGGATGAGCCCGGATCAAGGAGTCCGTTTTTGCGGTTTATTGGGTCTCCGTCCTCCGGTGGAAGTACAATTGGCTCTGCTAACTCCAACGACGAAGATAATTTTTTTGGTCCTGTATCAGCAAATTTTATCAGACGAGATTTACTGGACTCTTCAGCTTCAGATGCAAATCATGATCAAACTATGGATTCAACAGCCTTTTCAATGCATTTTCGTAGCATTGCTAGGTCAGACTCAGAAGTGGAATTGAAAACCTCAACTGGGGTCCACCTTTCCTTTGATGAGAAAACCCCAACTCATGATTCTGTTCCCAATAACACAGGAAATTCAATGTTAATGACACTAGCTAAGAAGCCAGATTATCGACCTTCTTTATCCACCTCCAAATTAAGCACTGCATCTGAGTCGAATGATATGAGTATTGTTGGAGAATATCACTATAAGTATGACTATGGAGAACTATCTCCTACATTGGATGCACTCATGGCAGACCCTTCTGGTGTTTCTATCTTGAAATCACCAAGAAATGTTGAAGCAACCATGGAAAATGGGGATAACCTCATGGATTTGAGTTGTAATGAAGATAATGATTTACAAGGGATTAGTGGTCATGAGTTGGTCAATGTTGATGCATTTCAGATAAAGTCAAACTTAGGCTTCTCTACAATTGGTCAAGGCAATCCTAGTCCTAAAACCACAATTTATATAAATGATGTTATTGGAAAGGAACATAAATCTCCTTTTATAGATGATGTTATTCCATCTAAATCACCAATGTATGTGACTCCTTCTCATAATCATTCAAGTGTTTTTGTAAGAACAGAAGATCAAGAACATGTTTTGAGTATTCAATCCATGCAAAAAAGCATTTCCAAACTCAAGATGCTTAAAGCTTCTCCCTTTTCTGCTGCTTTGAGTGCTAAACTTGAAGATTCAATCATCAAATCTGTCACCAGACCCTCTAAGATGACTCCTTTGAATGCTTTGTTGGAGAAAAACGACAAAAGTCCTTTACTTAATTCTATAAAAGACAGTGGTCATTTATCATCTGATGTTCAGAAAAAGAGAGCAAGAGAAAGTTCAACAAACATGGATGATATTAGGTTTGAGACACCAAATAATATTGTCCCTGTGACTCGTTTGCAAAAGATTGTTGAAATTGCATCACCATTGTTGATACCACATGAAAGCACACACTCTAAAAACACAACTGTTTTGCCTCAAAGTTTGGATTTTTCTTCACAGAAAAGGTTAAAGGTTGTAAATACAACAGAATTTAGAAGCAGCCCCTTGAGGATAGAAAAATCTGGTTCATTAGTTTCTTCCACTCAAGATGAAATGGTGGATATTAGGGAGGTTTCTCTTCATGAGGTTTGTTGTGACTCAAAAACTAAAGATAACCCTACAATCTTATTGAAAAATGAAGAACATGAGAAGTTTGAAGATAAGTTTATGGGAAGTGACATTGTTCTTGAAGAGATGAAAGGAACTTCTCCTGTTTTTGATGAAGGGACAGATAAACAATCTTGGAAGAAGAATTTGCATGATCAGTTTTGTGAAAGCCCTTCAAATAAACAGCCATGCAATAACAATTCACTGCAAGATGAAGATATGATGGTTGAGATAACTGCTACAACTCACACAAGTCCAAAAGCTCATGTAGACCCTGAAATCTTAAATGGAAATGAAATATCAACAATTGTGCAAAAATTAAACAATCCGAATGAGATAAAGACAATGGTTTCTATTGAAATGAAGAAACTTTTATCTCAATCTGTTGATAAGTTTAATTTGCATGTGATTGATCGTTTATCAGACATTGTGGATCAACTTTTAATGTCAAAAACATATCAGCTTCTCTCTGATGAAATCCAGTCTCAGAAAAGTGTAGATATCAGCAAAAAACTACAACATAAAAGAGCCTCAGAAATAAAATTGCTCTTGTGCAAATTTGTACATGAGAAAGCAAAGTTGCAGTTAATGCAAGTGAAACAAGAGATGTTACTGAAAAGGGTAAAATCACTTGCATCTGGAATATCGGAGTCTGAAGAATTAAAGTCAAACTTCCCGCCAAAAAAACTTTCAAGTGAGTCAATGTCAGTCAAAATGAAGGACATTCAAGAGAGCCAAATTGAGAGTGACAAAGTGTCTTCAACAAGACTGGAATTAAATCATATTGACCAAAAAATTGAAAGTTTGACCAAATCTTTTCACAAGTCATGTAAGATGAAAGAAGAACTGAGCTCCCTTGATACCATCACATTTGTTAATAATCATTTGAGGAAGCAAGCATGCTGCCAGATCATACGAAAGGATGTTCAGCTTTGGGTTGTAGACAATCTGAAGAATAGGAACGGTTGCCACAGTGTTGATCTCAATTATCTTGACTTAATGACTCAAAGGTTATCACTAAATGCTGGTCGAGTCCCGAGTGTTTCCATTTCTTATGAATTGAATGATGTAAATATTAGCAAGATCTTCAAAGATATGGAAGCTTGCACTGCATTTAGATTTGTATTTAATGGTGGAGCAACACAGAAGCATGTTGATGGGACAAACTTGGCAAAAGAAACTCAAGTGACTGGTGCCCTTTTTGGTAATTTATTAGATGTAATGGAAGAAATACAACATTCAAGAATACAGCTTAAAAACCTAATTTCTACAAGATTTCGCACACCCTTAGCGGATCAACTTGACCTAGAGCTCTGTTTCTTTAATCCAAAACATCGCATGAAGGCAACAGTCACTTTAAACTTTTCATGTTTAAAAAGGGGTATATATCCATCCGAGATCATTCCATATCAAATTCACATTCCAGCCAATCAACAATCAAAATCCTCACCAATACTTGCGGATGAGATTACAGCAACACTTAAAAATCTTAAAACGGGATTTTTAAGGATTCAACGGGTATGCAGTTGCATTTCCAACAAGGTAAATACTAAATTATAG 3228 37.02 MASLVPVDDNSNTKSEEGTMAFHKKRARRVSFAENTSVHIFDRDEDSGTPLEPKPPSSPSDELGSGELNHERGQLFWNVDEDDNDNNNEDDDMDEPGSRSPFLRFIGSPSSGGSTIGSANSNDEDNFFGPVSANFIRRDLLDSSASDANHDQTMDSTAFSMHFRSIARSDSEVELKTSTGVHLSFDEKTPTHDSVPNNTGNSMLMTLAKKPDYRPSLSTSKLSTASESNDMSIVGEYHYKYDYGELSPTLDALMADPSGVSILKSPRNVEATMENGDNLMDLSCNEDNDLQGISGHELVNVDAFQIKSNLGFSTIGQGNPSPKTTIYINDVIGKEHKSPFIDDVIPSKSPMYVTPSHNHSSVFVRTEDQEHVLSIQSMQKSISKLKMLKASPFSAALSAKLEDSIIKSVTRPSKMTPLNALLEKNDKSPLLNSIKDSGHLSSDVQKKRARESSTNMDDIRFETPNNIVPVTRLQKIVEIASPLLIPHESTHSKNTTVLPQSLDFSSQKRLKVVNTTEFRSSPLRIEKSGSLVSSTQDEMVDIREVSLHEVCCDSKTKDNPTILLKNEEHEKFEDKFMGSDIVLEEMKGTSPVFDEGTDKQSWKKNLHDQFCESPSNKQPCNNNSLQDEDMMVEITATTHTSPKAHVDPEILNGNEISTIVQKLNNPNEIKTMVSIEMKKLLSQSVDKFNLHVIDRLSDIVDQLLMSKTYQLLSDEIQSQKSVDISKKLQHKRASEIKLLLCKFVHEKAKLQLMQVKQEMLLKRVKSLASGISESEELKSNFPPKKLSSESMSVKMKDIQESQIESDKVSSTRLELNHIDQKIESLTKSFHKSCKMKEELSSLDTITFVNNHLRKQACCQIIRKDVQLWVVDNLKNRNGCHSVDLNYLDLMTQRLSLNAGRVPSVSISYELNDVNISKIFKDMEACTAFRFVFNGGATQKHVDGTNLAKETQVTGALFGNLLDVMEEIQHSRIQLKNLISTRFRTPLADQLDLELCFFNPKHRMKATVTLNFSCLKRGIYPSEIIPYQIHIPANQQSKSSPILADEITATLKNLKTGFLRIQRVCSCISNKVNTKL 1075
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03357 1075 MobiDBLite consensus disorder prediction 104 123 - -
Lssa7g03357 1075 MobiDBLite consensus disorder prediction 440 457 - -
Lssa7g03357 1075 MobiDBLite consensus disorder prediction 1 17 - -
Lssa7g03357 1075 MobiDBLite consensus disorder prediction 1 123 - -
Lssa7g03357 1075 PANTHER OS06G0608100 PROTEIN 302 619 - -
Lssa7g03357 1075 Pfam Knl1 RWD C-terminal domain 812 963 IPR040850 -
Lssa7g03357 1075 MobiDBLite consensus disorder prediction 18 50 - -
Lssa7g03357 1075 MobiDBLite consensus disorder prediction 429 457 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03357 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
128101 Lssa7g03357 Lssa9g03756
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr7:177753396 Lssa9g03756 Lssa-Chr9:187749562 wgd