AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03360 ATGCATAAAACGGCGCAATCGTGGTTCACCGGAGGCCCGAGCCAGACGAACAGCGATCTGCTAAAGCAACCTCCTTCTCTTCTTGCTGATTGGAACGCTTACGCATCATCTTCACAATCTAACCAAGATCTAGATTCTTCCAACCTCGGTTTCGATCTCGAAGCCGCAGTTAGGGATAAGGTTTCCGGTACTTTCAACGTAGTTTCAAAGGGAGTGAGAGACATACCTGGAAGCTTGCAATCAGCCACCAGCAATGTCCCAACTGGAAAATCCTTTATGACATTTGGCATACTTCTTGCTGTTGGGATCTTTCTTGTCTTCATTGCTATCACTGTGTTTCTACCAGTCATGGTGCTTGTTCCTCAGAAGTTTGCCATATGTTTCACTATTGGATGTGCCCTCATAATCGCTTCCTTTTTTGCCCTCAAGGGATATAGAACTCAGTTTGCACATATGACGTCTAAAGAGAGACTCCCTATTACATTGGGGTTTATTGGTAGCATGTTGGGCACCATTTATGTGTCAATGGTGCTTCACAGTTATGTTCTTTCTGTCTTCTTCTCTATTTTACAGGTCATCTCTTTGTCCTATTATGCAATTTCCTACTTTCCTGGAGGATCAGCTGGCTTGAAATTCTTCACTTCTGCAATTACCTCTTCAATTCTGAGATGCTTTGGGAGGTGA 684 43.71 MHKTAQSWFTGGPSQTNSDLLKQPPSLLADWNAYASSSQSNQDLDSSNLGFDLEAAVRDKVSGTFNVVSKGVRDIPGSLQSATSNVPTGKSFMTFGILLAVGIFLVFIAITVFLPVMVLVPQKFAICFTIGCALIIASFFALKGYRTQFAHMTSKERLPITLGFIGSMLGTIYVSMVLHSYVLSVFFSILQVISLSYYAISYFPGGSAGLKFFTSAITSSILRCFGR 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03360 227 PANTHER UNCHARACTERIZED 1 218 IPR011691 GO:0016020(InterPro)|GO:0016192(InterPro)
Lssa7g03360 227 Pfam Got1-Sft2-like family 93 204 IPR007305 GO:0016192(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03360 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr4:71283662 Lssa7g03360 Lssa-Chr7:177810082 dispersed
Lssa Lssa-Chr5:207739539 Lssa7g03360 Lssa-Chr7:177810082 dispersed