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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03395	ATGGCAGCGGTCGGAGCCTTGAAGCCACCTCATTGCTTCTCTTCTTCCTCCGGCATTGCTGCTGAACGGAGAGACCTCCGCTCTTCGTCGTCGTCCTTTCGGAGTTTATCGTTTGCTTCGTCTCATCTGTCCGGAGACAAGGTATCTTCGGTATCATCCGTGCGACCACGGCGTCATGGAGGTAGAGCTTCGGTGGTTGTTTCTCCCAAAGCTGTTTCCGATTCCAAAAATTCGCAGACATGTCTTGATCCTGACGCTAGTCAAAGTGTTCTTGGGATAATACTTGGAGGTGGAGCTGGGACACGTCTTTACCCTTTAACAAAGAAAAGGGCAAAGCCTGCTGTTCCTTTAGGAGCAAACTACAGGCTTATCGACATTCCTGTAAGCAACTGCTTAAACAGCAACATATCAAAGATTTATGTTCTCACACAGTTCAATTCTGCATCACTCAATCGCCACCTGTCACGTGCTTATGCAAGCAACATGGGTGGCTACAAGAACGAAGGGTTTGTTGAAGTCCTTGCAGCTCAACAAAGCCCAGAAAATCCAAACTGGTTCCAGGGGACTGCTGATGCAGTGAGGCAGTATTTGTGGCTATTTGAAGAGCACAATGTTCTAGAGTACCTAATCCTTGCTGGAGATCATTTATACCGTATGGATTATGAGAGATTTGTTCAAGCTCATAGAGAAACTGATGCTGACATCACTGTAGCAGCGTTACCAATGGATGAAAAACGTGCAACTGCATTTGGACTAATGAAGATTGATGAAGAAGGGCGTATAATTGAATTTGCAGAAAAACCAAAAGGAGAGCAACTAAAAGCTATGAAAGTTGATACCACAATCTTAGGGCTTGATGAAGAGAGAGCTAAAGAGATGCCTTATATTGCTAGTATGGGAATATATGTTGTCAGCAAAGATGTTATGTTGGATTTGCTGAGGGATAAGTTTCCTGGAGCTAATGATTTTGGAAGTGAAGTTATCCCTGGTGCAACTTCTATTGGCCTAAGAGTACAAGCTTACCTTTATGATGGCTATTGGGAAGATATTGGTACCATTGAGGCTTTTTACAATGCCAATTTGGGTATCACAAAAAAGCCAATCCCAGATTTCAGCTTTTATGATCGATCATCCCCGATTTACACTCAACCTCGATACCTACCTCCTTCCAAGATGCTTGATGCTGATGTCACCGATAGTGTTATTGGTGAAGGGTGTGTCATTAAGAACTGCAAGATTCATCATTCGGTTGTTGGGCTTCGATCTTGCATAGCTGAAGGTGCGGTAATTGAAGATTCATTGCTGATGGGAGCAGATTATTACGAGACGGATGCTGATAGGGAGCTTCTTGCTGCCAATGGTAGTGTTCCAATTGGTATTGGGAAAAATACTCATATCAAAAGAGCGATTATTGACAAGAATGCACGCATAGGAGACAATGTTAAGATTATAAACAGCGATAATGTTCAAGAAGCAGCAAGGGAAACAGATGGGTACTTTATAAAAAGCGGGATCGTTACAGTTATCAAAGACGCGTTAATTCCTTCTGGAAGCATAATCTAG	1563	43.12	MAAVGALKPPHCFSSSSGIAAERRDLRSSSSSFRSLSFASSHLSGDKVSSVSSVRPRRHGGRASVVVSPKAVSDSKNSQTCLDPDASQSVLGIILGGGAGTRLYPLTKKRAKPAVPLGANYRLIDIPVSNCLNSNISKIYVLTQFNSASLNRHLSRAYASNMGGYKNEGFVEVLAAQQSPENPNWFQGTADAVRQYLWLFEEHNVLEYLILAGDHLYRMDYERFVQAHRETDADITVAALPMDEKRATAFGLMKIDEEGRIIEFAEKPKGEQLKAMKVDTTILGLDEERAKEMPYIASMGIYVVSKDVMLDLLRDKFPGANDFGSEVIPGATSIGLRVQAYLYDGYWEDIGTIEAFYNANLGITKKPIPDFSFYDRSSPIYTQPRYLPPSKMLDADVTDSVIGEGCVIKNCKIHHSVVGLRSCIAEGAVIEDSLLMGADYYETDADRELLAANGSVPIGIGKNTHIKRAIIDKNARIGDNVKIINSDNVQEAARETDGYFIKSGIVTVIKDALIPSGSII	520

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03395	520	ProSitePatterns	ADP-glucose pyrophosphorylase signature 1.	96	115	IPR005836	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Lssa7g03395	520	SUPERFAMILY	Trimeric LpxA-like enzymes	383	520	IPR011004	-
	Lssa7g03395	520	NCBIfam	glucose-1-phosphate adenylyltransferase	90	484	IPR011831	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Lssa7g03395	520	Gene3D	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	70	385	IPR029044	-
	Lssa7g03395	520	Gene3D	Hexapeptide repeat proteins	386	520	-	-
	Lssa7g03395	520	Pfam	Nucleotidyl transferase	92	365	IPR005835	GO:0009058(InterPro)
	Lssa7g03395	520	ProSitePatterns	ADP-glucose pyrophosphorylase signature 2.	185	193	IPR005836	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Lssa7g03395	520	FunFam	Glucose-1-phosphate adenylyltransferase	71	385	-	-
	Lssa7g03395	520	ProSitePatterns	ADP-glucose pyrophosphorylase signature 3.	297	307	IPR005836	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Lssa7g03395	520	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	89	481	IPR029044	-
	Lssa7g03395	520	MobiDBLite	consensus disorder prediction	46	83	-	-
	Lssa7g03395	520	FunFam	Glucose-1-phosphate adenylyltransferase	386	520	-	-
	Lssa7g03395	520	PANTHER	GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED	61	520	IPR011831	GO:0005978(InterPro)\|GO:0008878(InterPro)
	Lssa7g03395	520	CDD	LbH-G1P-AT-C	388	514	-	-
	Lssa7g03395	520	CDD	ADP-Glucose-PP	101	350	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03395	K00975	glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr7:178974944	Lssa9g03933	Lssa-Chr9:198396361	dispersed
	Lssa	Lssa-Chr3:71888638	Lssa7g03395	Lssa-Chr7:178974944	transposed
	Lssa	Lssa-Chr3:100240100	Lssa7g03395	Lssa-Chr7:178974944	transposed
	Lssa	Lssa-Chr4:106331263	Lssa7g03395	Lssa-Chr7:178974944	transposed
	Lssa	Lssa-Chr5:64188988	Lssa7g03395	Lssa-Chr7:178974944	wgd