AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03411 ATGGCGGACAAGAAAGAAAAGACTAGCGTTCAAGCTACAGGAAGCTCTGAAATGAGAAGATCTCAAGAAGATGAAGTTGCAGGAGATGAAAGCTCTGGAATCCGGACGGTGGAGACTCTACTGAGGCTGTTTCCGGTAGGGTTGTGTGTGGCGGCGCTAGTGGTTATGCTTAAAGATTCCGAAACTAATGAATATGGCTCTCTTTCCTACTCCAACATCACTGCTTTCAGGTTTTTAGTGCATGCTAATGGCATCTGTGCTGGTTATTCGCTACTCTCGGCGGCTTTCACGGCGATACCTCGGCCTATAACCATGCAACGAGCTTGGACCTTCTTCCTCCTTGACCAGGTTTTGACATACTTGATACTGGCTGCCGGTGCGGTGGCGACGGAGGTGGCGTATCTGACATACAAAGGAGATCTGACGGTGACGTGGAGTGAGGTCTGTGGAACGTACGGCCATTTCTGCAGAAGCGCGATGGCTTCGATCATCATCACTTTCATGGTGGTGATCTGCTATGTTTTGCTGTCGTTAATCTCTTCTTACAGGTTATTCAGTAAGTATGATGCTCCTGTTGGGTATCATAACAAAGGGATCGAGATTGTTGACTTTGGGAATTAA 621 47.67 MADKKEKTSVQATGSSEMRRSQEDEVAGDESSGIRTVETLLRLFPVGLCVAALVVMLKDSETNEYGSLSYSNITAFRFLVHANGICAGYSLLSAAFTAIPRPITMQRAWTFFLLDQVLTYLILAAGAVATEVAYLTYKGDLTVTWSEVCGTYGHFCRSAMASIIITFMVVICYVLLSLISSYRLFSKYDAPVGYHNKGIEIVDFGN 206
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03411 206 NCBIfam plant integral membrane protein TIGR01569 41 182 IPR006459 -
Lssa7g03411 206 PANTHER CASP-LIKE PROTEIN 4A4 24 186 - -
Lssa7g03411 206 MobiDBLite consensus disorder prediction 1 30 - -
Lssa7g03411 206 Pfam Casparian strip membrane protein domain 32 172 IPR006702 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03411 - -