AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03435 ATGGGGAATAAGTTGGGTAGGAGGAGACAGCTAGTGGACGAGAAGTATACAAGACCTCAAGGGCTGTATCAACACAAGGATGTAGATCACAAGAAGCTTCGTAAGCTTATACTTGATTCCAAGCTCGCTCCTTGCTATCCCGGAGATGATGACTGCAGTTGCGATCTTGAAGAATGCCCGATTTGTTTCTTGTATTATCCAAGTCTAAATAGATCGCGATGTTGCACAAAAGGCATCTGTACAGAATGTTTCCTACAGATGAAGACCCCAAATTCCACACGCCCTACGCAGTATCCTTATTTCGTATGCCCCTTTTGTAAAACGTTAAACTATGCTGTGGAGTATAGAGGGGTGAAGACTAAAGAGGAAAAAGGGCAGGAACAAATTGAAGAACAAAGGGTGATTGAAGCAAAAATAAGAATGAGACAACAAGAAATTCAAGATGAAGAGGAAAGAATGCTAAAAAGACAAGAGAGAAGCTCTTCAAGCAGAATAATTGATTCAAATGAGGCTGAATATTTCTCTAGAGCAGCAACGCCTTCTTCAGAAGGTGAGGAAATTGTTTCCGCTCCTAATTCAGGTGTAACAACATTTAGACATCCTCAACGCCCTAGGGACAACAGAGAGGATGAGTTTGACCTTGACCCAGAGAACATAATGCTAATGGAAGCCATCTGGTTGTCATTTCAGGAGGATGGAAAAAACCAACGCCACAATGTGAATTATGGCGACGCAGCGCAATTAGCAAAATACGCAACAGAAGTTCGTGTTCTCGCGTCCATGGCCCCACAAGCTGAGTCATCATCATTATCATCTTCATCCTCATCCTCATCGCCTTCCGGTGGTCTAGCGTGCGCCATAGCCGCACTCGCCGAACGCCAACAAATGGGGGGAGAATCTTCCACGAATTACAACAACTACAATGGCAACGTATCATCAACGTACAACATCATGCATCCCGAATCCACCTCACTCAATACTCATCTTCAAGATGGAGGATGGGGAAACAACAACAACAATGAAACTTCATATGGGTATCATCATGATGATAATGAGTATGGGGGACATGATGAGATGGAGGGTGGAGGTGGTGGTGGAGGAGGTGGAGGTGGTGGTGGAATAGTTCCTGAGAGCTTTGAGGAGCAGATGATGTTGGCAATGGCGGTTTCATTGGCGGAAGCTCGAGCTAGGAGTAGTAGTGGTGCACCGGAGGTTGCGTGGATTTAG 1227 45.15 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQYPYFVCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKRQERSSSSRIIDSNEAEYFSRAATPSSEGEEIVSAPNSGVTTFRHPQRPRDNREDEFDLDPENIMLMEAIWLSFQEDGKNQRHNVNYGDAAQLAKYATEVRVLASMAPQAESSSLSSSSSSSSPSGGLACAIAALAERQQMGGESSTNYNNYNGNVSSTYNIMHPESTSLNTHLQDGGWGNNNNNETSYGYHHDDNEYGGHDEMEGGGGGGGGGGGGGIVPESFEEQMMLAMAVSLAEARARSSSGAPEVAWI 408
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03435 408 MobiDBLite consensus disorder prediction 148 165 - -
Lssa7g03435 408 PANTHER PROTEIN SIP5 1 303 IPR039301 GO:0005737(PANTHER)
Lssa7g03435 408 MobiDBLite consensus disorder prediction 148 215 - -
Lssa7g03435 408 MobiDBLite consensus disorder prediction 357 376 - -
Lssa7g03435 408 MobiDBLite consensus disorder prediction 201 215 - -
Lssa7g03435 408 MobiDBLite consensus disorder prediction 185 200 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03435 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
127475 Lssa5g03732 Lssa7g03435
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr5:270492477 Lssa7g03435 Lssa-Chr7:181335202 wgd