AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03459 ATGTCTGGGAGGAATCGTGGACCTCCACTTCCAATGAAAGGCCCATCTCATGCTGGATTGGCACCCATTCACGAGCCTCCATATGGAAGGAATCTAGGTCCAATGCCTCATCCTGCATTGCTTGAGGAGATGAGGGAAGCTCAATTTGGAATGGGTCCCAGACAACTCCCTCCTCACCCTGCTATCATTGAGGAGCGATTAGCAGCTCAACATCAGGACATTCAAGGGCTTTTGGTTGATAATCAGAGGTTAGCTGCAACCCATGTTGCACTCAAGCAAGAACTTGAAGCTGCACAACATGAGCTTCAACAAACAGACCGTTTTGCTCGCAATTTCCTCATGGAGAAAGATATGCAGATGAGAGAGTTGTATGAGAAGTCAGCAAAAATGGAACACGATCTTCATGGAGTAGAAGCTATGCGTGCTGAGCTTATGCAATTACATGCTGACATCAATGAGCTGACTTCTACACGCCAAAAACTTACTAGTCAAGTTCAGGGTATGACTCAAGATCTTGCTAGAGCTACTGCTGACTTGCAGCAAGTCCCAGGACTGAAGTCAGAAATTGATGGGCTTAGACAAGAATTACAACATGCAAGGGCTGCAATTGAACATGAGAAGAAGGGGCATGCAGAGAACTATGAACATGGTCAAGTGATGGAGAAGAATTTACTCTCTATGGCTCGTGAGCTTGAAAAATTGCGTGCTGAGATGGCTAATGCTGAAAAGCGGGCCCGTGCTGCTGCAGCTGTAGCTGTAGCCAATCAAAATCCAGGTAGGCCGTTACTCCTTGTTGATGATTCTTTTAGGAAGTTATCAAATTGCAGCCTGGAGCAGAAGGTTACCCTCAGTATGGGCCTGGGCCTGGATCTTGGGGATCATATGATATGCAAAGGGCTCAAGGACACAGATAGAGTGATAGACTATCTCATGCTAAGATGTGGACTCTTATGA 954 46.23 MSGRNRGPPLPMKGPSHAGLAPIHEPPYGRNLGPMPHPALLEEMREAQFGMGPRQLPPHPAIIEERLAAQHQDIQGLLVDNQRLAATHVALKQELEAAQHELQQTDRFARNFLMEKDMQMRELYEKSAKMEHDLHGVEAMRAELMQLHADINELTSTRQKLTSQVQGMTQDLARATADLQQVPGLKSEIDGLRQELQHARAAIEHEKKGHAENYEHGQVMEKNLLSMARELEKLRAEMANAEKRARAAAAVAVANQNPGRPLLLVDDSFRKLSNCSLEQKVTLSMGLGLDLGDHMICKGLKDTDRVIDYLMLRCGLL 317
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03459 317 Coils Coil 182 209 - -
Lssa7g03459 317 Coils Coil 81 101 - -
Lssa7g03459 317 PANTHER PROTEIN FLX-LIKE 2 1 250 IPR040353 -
Lssa7g03459 317 Coils Coil 137 178 - -
Lssa7g03459 317 Coils Coil 217 251 - -
Lssa7g03459 317 MobiDBLite consensus disorder prediction 1 25 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03459 K27811 protein FLX/FLXL
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr7:74557531 Lssa7g03459 Lssa-Chr7:183257043 dispersed
Lssa Lssa-Chr7:183257043 Lssa9g00702 Lssa-Chr9:19962139 transposed