Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03466 | ATGAAGAGTGCATATAGAAGTGTCATGTTCTATATTGGGCAAAAGGAACTCGAAATGCAATTCAAAATGAACAGGATAGTAGCTCAATGCAAACAAAAATGCGAGACAATGCAAGAAAAATTCACAGAAAAAATGGAACAGTTGCACACTGCATATCAGAAAATGGGCAAAAGGTGTCAAATGATGGAACAAGAAATTCAAAACTTATCCAAAGATAAACAAGAACTCCAAGAAAAATTTTCTGAGAAATCCAGGCAAAAGCGAAAACTGGATGAGATGTATGACCAATTGAGAAGTGAGTATGAGTCGGTCAAACGGTCAGCCATTCAACCTGCAAACAACTTTTTCTCAAGGGGTGGTGGTGATTCTGATCTGTTTTCCAGTCCTGCTAACATGATGGATAACAGAGATCCCATGAGGAAAGATTGGTCGGTTTACACCCCTGACACTCCAGGACCTCGGGAAGATATATGGCCAGCAACCACAAGACAAAACAGTTCTAACTCTGGTGGGCCCTTCGACATCTCTAATAGCCCACCTGTGAAACATTCAGTAAATCCAGTTGAAAACAGAAGAAGTATTGGTCGCCAGATGTTTGGTGGCGGCGGTGGTGGTGGTGGCGGCGGCGGTGGTGGTGTTGGTGGAGCGGGAAATCCTTCGATGACATTGAGAAATCTGATATTATCTCCAATGAAAAGGCCTCAACTCTCTCGTACCCGACCTCAGTTGTTCACGTTATAG | 741 | 43.18 | MKSAYRSVMFYIGQKELEMQFKMNRIVAQCKQKCETMQEKFTEKMEQLHTAYQKMGKRCQMMEQEIQNLSKDKQELQEKFSEKSRQKRKLDEMYDQLRSEYESVKRSAIQPANNFFSRGGGDSDLFSSPANMMDNRDPMRKDWSVYTPDTPGPREDIWPATTRQNSSNSGGPFDISNSPPVKHSVNPVENRRSIGRQMFGGGGGGGGGGGGGVGGAGNPSMTLRNLILSPMKRPQLSRTRPQLFTL | 246 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03466 | 246 | MobiDBLite | consensus disorder prediction | 159 | 184 | - | - | |
| Lssa7g03466 | 246 | SUPERFAMILY | Myosin rod fragments | 31 | 107 | - | - | |
| Lssa7g03466 | 246 | Coils | Coil | 52 | 107 | - | - | |
| Lssa7g03466 | 246 | MobiDBLite | consensus disorder prediction | 149 | 218 | - | - | |
| Lssa7g03466 | 246 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE CCNB1IP1 HOMOLOG | 1 | 246 | - | GO:0051026(PANTHER) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03466 | K10639 | E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr3:99737031 | Lssa7g03466 | Lssa-Chr7:183721411 | dispersed | |
| Lssa | Lssa-Chr7:183721411 | Lssa8g01119 | Lssa-Chr8:39265526 | dispersed |