AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03476 ATGGCCGATATCGAAACCCTAGGTATTCTAGATGAGATTCAAGCACTCGTCTCCGATAAGCTCCAAGTGGTTTCTTACAAGTGGCTGAGTCGGAACTTTTTGGTGCCATCAAATACTGCCAAGAAACTCCTTCAAGAGTTCGTAGAAAAGCAAGGATCTCAACTGGAAGTGTTATATTCTTTATCTGGATGGTTGAAGAATAATCCTTCAGTTTACCACACAAAGCTTGTTTTGAGCTCTAAACTTTCAGAAGCCAAAGAAGAATTTGGTGACAATTATTCAGTTCAAGTATATAGTGTTCAAGCTTGTATCCCTAAAGATCCAGCAGTGCTTTGGAATGCTGAGTTTATACAAGCAGAAGAGCTCTTCAAGGAGCCCCCTAATGTTGTTAACTGCTTACGTGACAACAGGTTTTGTGGGGTCTCAAATTCATTTGTGAAACGCAATGCTGAAGGAACACCTATAGTCAGCAAAGCTTCATTTCAAGAAAAAAAGGTTGAAGAATCAAACCCTAAACCTGATAAGGGAAAAGATAATCAAAATGGAAGCCATAGGGCCCAAGTAATTGAACAAGAGGTCAAACCAGTTCCAAAAAAAGATCAAGCTCCTCAATTGCCAAACAAAAAGAAAGCCCAGAATGATAAAACCTCTTCTGGGACTTCAGGTTCATTAGCTAGTATGTGGGGTCGTGCATCTGTAAAACCAAAACCCGAATCTGCACCTGTAAAAACTGATAATCCCATTCCTGTTTCAAATGATGCTCAAGTTCTTGCTAATGAATTGGAAGAAGATGATAGCAGTGGTGATGAAGATAAGCAAATGAACTTCAAGAGAGGTTCTAATGGTGATGGGAATAATAGAAAAAGGAGAGTTGTCATTGATTACTCTGATGAAGAAGATGAGATAAAAGATGCAGTGAGTTTAGCCTCACCTGATCCTCCAAAAAAGCAAGTTTCTGTGGATTCAAAGAAAAGTTCTAAAAAAACTACAGCTCTTGAAAATAAGAGCTTGGATTTTGATGAACTAAAGGAAGAGAAAGTCAAGGTATCTGACATTGATGCTAAAAATATATTGAAAGAAGAAAACCATGACAAGAAAATTGTGAAACCTATTTCAAATGAGAAAATTTGTCCTGAAAAAGATGATGTAGAACAGAAAGCTAAAGGGAGTGATGCTGCTCAAAAGGCGACTAAAAAGAGAAAAGTTTTGAAGACACGAATCGATGAACGTGGGAGAGAAGTAACTGAGGTTGTTTGGGAGGATGAAGAAGAGAAAGAAACAAAGCCTGATGATAATACAAGAAAAAATAAAGACGACAATAATACCATCACCACCAACAGGCCTCTTGCAGCAGCTGCTGCTGCTCCCAAGAAGGTTGGAAATGTTCAATCCAATGCAACAGGAAAAGCAGGAAACAAGAAAGCCATTTCCAAGGATCCAAAACAGGGGAATATAATGTCCTTCTTCAAAAAGAAATAA 1479 38.34 MADIETLGILDEIQALVSDKLQVVSYKWLSRNFLVPSNTAKKLLQEFVEKQGSQLEVLYSLSGWLKNNPSVYHTKLVLSSKLSEAKEEFGDNYSVQVYSVQACIPKDPAVLWNAEFIQAEELFKEPPNVVNCLRDNRFCGVSNSFVKRNAEGTPIVSKASFQEKKVEESNPKPDKGKDNQNGSHRAQVIEQEVKPVPKKDQAPQLPNKKKAQNDKTSSGTSGSLASMWGRASVKPKPESAPVKTDNPIPVSNDAQVLANELEEDDSSGDEDKQMNFKRGSNGDGNNRKRRVVIDYSDEEDEIKDAVSLASPDPPKKQVSVDSKKSSKKTTALENKSLDFDELKEEKVKVSDIDAKNILKEENHDKKIVKPISNEKICPEKDDVEQKAKGSDAAQKATKKRKVLKTRIDERGREVTEVVWEDEEEKETKPDDNTRKNKDDNNTITTNRPLAAAAAAPKKVGNVQSNATGKAGNKKAISKDPKQGNIMSFFKKK 492
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03476 492 MobiDBLite consensus disorder prediction 317 331 - -
Lssa7g03476 492 Pfam DNA polymerase subunit Cdc27 23 492 IPR019038 GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0043625(InterPro)
Lssa7g03476 492 MobiDBLite consensus disorder prediction 379 402 - -
Lssa7g03476 492 FunFam DNA polymerase delta subunit 7 149 - -
Lssa7g03476 492 MobiDBLite consensus disorder prediction 417 441 - -
Lssa7g03476 492 MobiDBLite consensus disorder prediction 304 331 - -
Lssa7g03476 492 MobiDBLite consensus disorder prediction 270 291 - -
Lssa7g03476 492 MobiDBLite consensus disorder prediction 206 227 - -
Lssa7g03476 492 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 492 IPR019038 GO:0003887(PANTHER)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0006271(PANTHER)|GO:0006297(PANTHER)|GO:0043625(InterPro)|GO:0043625(PANTHER)|GO:1904161(PANTHER)
Lssa7g03476 492 MobiDBLite consensus disorder prediction 161 181 - -
Lssa7g03476 492 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 7 146 IPR041913 -
Lssa7g03476 492 MobiDBLite consensus disorder prediction 417 492 - -
Lssa7g03476 492 MobiDBLite consensus disorder prediction 156 291 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03476 K03504 DNA polymerase delta subunit 3