AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03483 ATGGAAGATTTAAAGATCAATGAAACAATACAAAAGGTTGGAGAAAAGTATAGATCGTTCCTCCATGAAGAAGCTAAAAACACCCATTGGAGACATGGTGCTCCTCCTACCTATGATGCTGTTAACCAACTTTTTGAAGAAGGTCGAACCAAGGTATGGGAAAAGGGATCACTAGAAGAAACTGTTCAAAACGCAATAAAGTCATGGGAGATGGAGCTTAGCCACAAGATTCGGATAAAAGATTTTAAGACCATTAATCCTGATAAGTTCAAGCTTATTGTCAATGGGAGGGAGGGATTGTCTGCGGAGGAAACACTGAAGGTGGGAAGTTACAATGCATTGCTGAAGAGTACACTTCCAGAAGAGTACAAGTACTACAAAGCAGAAGAAGAAACCTTCGAATCCTCTCACGACGTTTTCCGATCGGCGTTTCCTCGGGGATTTGCGTGGGAGGTGATCAGCGTTCATTCCGGACCTCCGGTGATATCGTACAAATTCCGGCACTGGGGTTACTTCGAAGGTCCGTTCAAAGGCCATAAACCTACCGGCGAAATGGTTGATTTCTACGGCATGGGCATCCTCAAGGTTGATGGATCGTTGAGAGCAGAAGATGTTGAGATCTATTACGATCCGGCAGATCTTATCTCGAAGCTGCTTAAGGGGGAGTTGATATCTCAGGAGGAAAGCCCCGCCGCGGATGCTCCTCCGGCGAACACCGGTAACTGCCCATTCGAGAAGCAAGTATGA 747 45.92 MEDLKINETIQKVGEKYRSFLHEEAKNTHWRHGAPPTYDAVNQLFEEGRTKVWEKGSLEETVQNAIKSWEMELSHKIRIKDFKTINPDKFKLIVNGREGLSAEETLKVGSYNALLKSTLPEEYKYYKAEEETFESSHDVFRSAFPRGFAWEVISVHSGPPVISYKFRHWGYFEGPFKGHKPTGEMVDFYGMGILKVDGSLRAEDVEIYYDPADLISKLLKGELISQEESPAADAPPANTGNCPFEKQV 248
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03483 248 Gene3D - 112 219 - -
Lssa7g03483 248 MobiDBLite consensus disorder prediction 227 248 - -
Lssa7g03483 248 PANTHER PATHOGENESIS-RELATED FAMILY PROTEIN 7 244 IPR053218 -
Lssa7g03483 248 SUPERFAMILY NTF2-like 132 217 IPR032710 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03483 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr1:9367382 Lssa7g03483 Lssa-Chr7:184308318 dispersed
Lssa Lssa-Chr1:9391297 Lssa7g03483 Lssa-Chr7:184308318 dispersed