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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03485 ATGGACTTCCACCGATTCTACGAAACATGGTACGAGCAGCTCCACCACCAAATCCACCACCTCACCAAATTCCCCCGTCCACCCACCACCGATGACGACCACCACCAACTCACCCAAGTCGTCGATAAAACCATGTCCCACTTCTCCGAGTTCTACCGAGTCAAGTCCCTCGCCGCTAATCAAGACGTCCTCTCCATCTTCTCCGCCCGGTGGTCCACCACTCTCGAACGCTCTCTCCACTGGATCGCCGGATGGCGCCCCACCACCGCTTTTCACCTTATCTACACTGAATCCAGCATACTTTTTGAGTCTCGCATACTCGACATCCTCCATGGCATTCGCACCGGTGACCTCGGCGATCTCTCACCGGCGCAGTTTACCCGTGTCAGTGAGCTTCAGTGTGAGACTGTTCAACAAGAGAACGCCATCACCGATCAGCTCTCGGAGTGGCAGGCATGCAAATTCTATATCTTTTGCTTTTCTCTTCATTTTTGTTCAAAAAAGCAGGATGAGGCAAGTGAGCTAATAGGCGGGTCGTGTGGCGATCTTGATAAGAAGATCGGACGGCTGGTTCAGATCGTGGAGAAGGCGGACGAACTACGGCTGAGAACATTGAAGGCGGTGGTGGAGCTTCTGACGCCACAGCAAGCGGTGGAGTTTTTGATCGCGGCTGCGCAGTTGCATTTTGGGATCCATAGATGGGGTTTGAATCATGACCGTGAACGTGCTGGGAAATGA 738 53.25 MDFHRFYETWYEQLHHQIHHLTKFPRPPTTDDDHHQLTQVVDKTMSHFSEFYRVKSLAANQDVLSIFSARWSTTLERSLHWIAGWRPTTAFHLIYTESSILFESRILDILHGIRTGDLGDLSPAQFTRVSELQCETVQQENAITDQLSEWQACKFYIFCFSLHFCSKKQDEASELIGGSCGDLDKKIGRLVQIVEKADELRLRTLKAVVELLTPQQAVEFLIAAAQLHFGIHRWGLNHDRERAGK 245
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03485 245 ProSiteProfiles DOG1 domain profile. 1 241 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Lssa7g03485 245 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 2 243 IPR051886 -
Lssa7g03485 245 Pfam Seed dormancy control 32 96 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03485 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
128112 Lssa7g03485 Lssa9g03654
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr7:184353441 Lssa9g03654 Lssa-Chr9:181665885 dispersed
Lssa Lssa-Chr1:104929458 Lssa7g03485 Lssa-Chr7:184353441 transposed
Lssa Lssa-Chr7:184353441 Lssa9g03652 Lssa-Chr9:181637912 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lssa9g03924 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.428 1.51e-42 137.0
Lssa9g01140 . 16 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 52.812 1.21e-90 270.0
Lssa9g02352 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 56.041 1.18e-115 338.0
Lssa9g01453 . 7 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 42.9 6.91e-54 176.0
Lssa9g04322 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.222 3.65e-23 96.7
Lssa9g03654 ACH 114 316 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 21.983 1.71e-10 58.9
Lssa9g03615 ACH 1 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 50.581 9.90e-91 271.0
Lssa9g00789 . 1 441 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 47.551 5.41e-104 315.0
Lssa9g04007 . 19 454 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34000 38.724 1.18e-65 212.0
Lssa9g04003 ACH 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 37.585 5.05e-69 220.0
Lssa9g01015 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 56.645 3.51e-166 476.0
Lssa9g03653 . 114 202 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 26.667 5.81e-09 52.0
Lssa8g04463 . 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 57.166 0.0 538.0
Lssa8g00483 ACH 1 236 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 64.173 9.34e-97 286.0
Lssa8g01370 . 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.318 2.07e-43 141.0
Lssa8g04322 ACH 1 228 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 64.706 3.31e-104 302.0
Lssa8g00211 . 1 135 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 60.294 2.75e-46 149.0
Lssa8g05538 . 1 170 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 52.353 6.13e-46 156.0
Lssa8g03060 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 55.696 7.82e-100 294.0
Lssa8g04394 . 205 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 45.238 2.45e-21 89.0
Lssa8g04066 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 38.562 2.42e-71 226.0
Lssa8g04767 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 52.454 1.04e-95 284.0
Lssa7g03536 ACH 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 55.657 5.10e-99 293.0
Lssa7g03485 ACH 112 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 27.803 1.83e-18 81.3
Lssa7g02909 . 206 371 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 36.517 3.25e-20 85.5
Lssa7g03534 . 1 306 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 55.657 1.09e-100 297.0
Lssa7g02611 ACH 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 34.182 3.25e-27 107.0
Lssa7g02980 ACH 1 431 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G19290 46.374 1.28e-97 296.0
Lssa7g01684 . 19 104 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 59.302 8.60e-33 111.0
Lssa7g01771 . 214 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 44.444 2.85e-18 79.7
Lssa7g03130 ACH 24 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 49.64 1.95e-41 134.0
Lssa7g00074 ACH 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 45.542 2.48e-93 282.0
Lssa7g02664 . 120 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 45.673 2.23e-38 134.0
Lssa6g01259 . 329 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 68.142 3.94e-41 148.0
Lssa6g00783 ACH 1 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 73.203 5.54e-61 184.0
Lssa6g03317 ACH 3 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 48.711 2.19e-89 270.0
Lssa6g00821 . 327 482 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 49.419 3.66e-40 142.0
Lssa6g00424 . 206 405 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 32.701 2.70e-15 72.0
Lssa6g03426 . 214 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 46.154 4.04e-20 84.7
Lssa6g01361 . 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 60.421 0.0 582.0
Lssa6g03667 . 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.617 3.39e-44 146.0
Lssa6g02327 . 118 284 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 41.279 3.30e-20 88.6
Lssa6g03338 . 214 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 41.88 1.52e-15 72.8
Lssa6g02220 . 214 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 45.299 5.28e-19 82.0
Lssa5g01804 . 62 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 53.604 2.06e-67 211.0
Lssa5g01614 . 206 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 44.0 7.87e-20 84.3
Lssa5g05000 . 29 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 48.299 1.32e-166 494.0
Lssa5g04938 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 55.09 1.93e-103 308.0
Lssa5g04876 . 6 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 54.574 1.98e-95 283.0
Lssa5g03274 ACH 41 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 33.217 4.26e-30 115.0
Lssa5g00830 ACH 10 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 53.416 3.11e-45 144.0
Lssa5g01963 . 1 389 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 60.732 1.27e-146 420.0
Lssa5g05884 . 223 399 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 62.36 6.29e-56 194.0
Lssa5g02004 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 71.257 1.17e-160 449.0
Lssa5g02235 . 21 333 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 69.301 6.28e-149 427.0
Lssa5g04849 . 326 402 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 62.821 1.18e-25 98.6
Lssa5g00941 ACH 25 152 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 76.923 8.97e-63 189.0
Lssa5g03707 ACH 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 54.321 1.22e-51 161.0
Lssa5g02908 . 235 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 65.7 9.14e-76 235.0
Lssa4g04225 . 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 52.0 7.17e-45 145.0
Lssa4g02269 . 223 399 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 61.798 2.18e-55 192.0
Lssa4g04928 . 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 41.277 5.68e-38 133.0
Lssa4g05842 . 52 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 68.966 1.83e-50 159.0
Lssa4g04682 . 10 130 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 59.504 4.12e-40 130.0
Lssa4g01038 . 1 155 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 36.25 2.65e-23 90.5
Lssa4g02840 . 296 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 37.931 4.53e-11 55.8
Lssa4g04041 ACH 9 163 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.375 6.01e-43 138.0
Lssa4g05679 . 206 371 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 36.517 2.77e-20 85.9
Lssa4g04668 . 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.852 1.24e-46 152.0
Lssa4g04336 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 51.667 5.50e-113 335.0
Lssa4g01893 . 214 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 45.299 7.75e-18 77.8
Lssa4g05194 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.193 4.74e-98 291.0
Lssa4g03405 . 223 472 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 56.972 4.29e-75 244.0
Lssa4g01189 ACH 18 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 47.179 2.29e-96 289.0
Lssa3g03447 . 16 137 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 47.518 1.85e-30 110.0
Lssa3g02623 . 41 132 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 47.826 4.79e-23 87.0
Lssa3g04768 ACH 12 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 50.39 1.79e-102 305.0
Lssa3g00654 . 1 376 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 58.486 7.60e-127 368.0
Lssa3g01828 . 214 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 45.299 1.63e-17 77.0
Lssa3g01675 ACH 1 256 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 56.923 2.30e-90 265.0
Lssa3g02084 . 4 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 54.545 2.29e-149 432.0
Lssa3g01605 . 1 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 48.885 1.25e-131 390.0
Lssa3g02695 . 1 286 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 57.099 5.16e-106 310.0
Lssa2g00032 . 43 293 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 38.55 1.42e-19 85.1
Lssa2g04112 ACH 1 366 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 55.784 1.58e-110 325.0
Lssa2g03422 . 213 303 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 40.659 5.37e-14 69.3
Lssa2g00994 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.375 1.29e-178 495.0
Lssa2g00270 . 63 263 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 30.435 1.50e-13 64.7
Lssa2g01114 . 27 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.405 5.14e-136 392.0
Lssa2g00751 . 139 469 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G19490 36.857 4.77e-35 131.0
Lssa2g03885 . 7 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.235 1.52e-42 149.0
Lssa2g00687 . 235 437 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 64.706 1.47e-73 229.0
Lssa1g00293 ACH 14 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 46.608 2.22e-77 239.0
Lssa1g02109 . 196 328 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 40.278 2.37e-14 71.2
Lssa1g00650 . 223 472 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 57.371 1.59e-75 245.0
Lssa1g03697 . 19 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 54.305 2.29e-46 149.0
Lssa1g00660 ACH 9 165 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 51.266 5.13e-46 146.0
Lssa1g02873 . 112 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 27.309 1.11e-16 76.6
Lssa1g02654 . 26 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 53.237 1.55e-41 135.0
Lssa1g02447 . 297 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 36.957 1.44e-06 47.8
Lssa1g00807 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 52.826 2.16e-113 335.0
Lssa1g03509 . 329 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 46.903 1.93e-19 86.3
Lssa1g01736 ACH 223 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 60.731 1.80e-69 227.0
Lssa1g02778 . 56 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 60.069 3.73e-108 323.0
Lssa1g02578 . 90 180 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 43.956 6.56e-19 77.0