Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03497 | ATGGCTTCTCCCCATTCCATCTATGCAACTTCCCTTCTACTTTTGCTCAGTTTTCAACTACTTTCCACCATTTCTGAAGCTGTTGTGTATGCTTCAAACACCTTCACGTACGTAAACGAAGGTGATTTTGGAGATTATGTCGTCGAGTACAATGCAAATTATCGCGCCCTTCCCCCTTTTAGTAACCCATTCCAGCTTTGTTTCTACAACACCACCCCTAATGCATTCACTCTAGCCCTTCGTATGGGTACAGTCCGATCTGAGTCGCTCATGCATTGGGTTTGGGAAGCTAACCGGGGTAACCCAGTTCGTGAGAACTCTACCCTCACCTTCGGTACAGATGGAAACCTTGTCCTGATGGATTCCGATGGCCACATTGCCTGGCAAACTAAAACCTCCAACAAGGGTGTCGTCGGTTTTCAGGTGCTACCGACCGGTAACATGGTTCTTCATGATAGGAAGGGAAATTTCTTATGGCAAAGCTTCGACTCCCCAATGGACACCCTCTTGGTGGGTCAATCTTTCCGAGCTGGTGGTGCCAGTAAGCTAGTGAGCCGGGCTTCCGCCGCGAACAACAATGGACCATATAGCTTGGTTATGGAGCCTAAACAGTTAGCCATGTATTACAAGAGCACCAACTCGCGTCGCCCAATCCTTTATTGGTCCTCTATCGAATGGTTCACCATGGTCAATGCTGACCCAGTTGTTAGGAGAATAAAAGTGCACGTGGTCACCTGCTCAGTAAAAGATCCGTTGCTTATTTTTCTACTTTCAGTTATAGCTTAG | 786 | 47.2 | MASPHSIYATSLLLLLSFQLLSTISEAVVYASNTFTYVNEGDFGDYVVEYNANYRALPPFSNPFQLCFYNTTPNAFTLALRMGTVRSESLMHWVWEANRGNPVRENSTLTFGTDGNLVLMDSDGHIAWQTKTSNKGVVGFQVLPTGNMVLHDRKGNFLWQSFDSPMDTLLVGQSFRAGGASKLVSRASAANNNGPYSLVMEPKQLAMYYKSTNSRRPILYWSSIEWFTMVNADPVVRRIKVHVVTCSVKDPLLIFLLSVIA | 261 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03497 | 261 | CDD | B-lectin | 48 | 165 | IPR001480 | - | |
| Lssa7g03497 | 261 | Pfam | D-mannose binding lectin | 94 | 177 | IPR001480 | - | |
| Lssa7g03497 | 261 | Gene3D | - | 42 | 163 | IPR036426 | - | |
| Lssa7g03497 | 261 | SMART | blect-4 | 48 | 165 | IPR001480 | - | |
| Lssa7g03497 | 261 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 73 | 209 | IPR036426 | - | |
| Lssa7g03497 | 261 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 52 | 225 | IPR051343 | - | |
| Lssa7g03497 | 261 | ProSiteProfiles | Bulb-type lectin domain profile. | 32 | 163 | IPR001480 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03497 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr7:184917142 | Lssa7g03500 | Lssa-Chr7:184989961 | dispersed | |
| Lssa | Lssa-Chr7:184864610 | Lssa7g03497 | Lssa-Chr7:184917142 | proximal |