AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03520 ATGCTCTGTGTACCTCTCCGTTCTATCTCTCCCCACCCCAAAATCCCACTTGGATCGCAAGCCAAACTGTTAAGATTCTTGCCAACAACCCGTTTTGTTCATTTTCATCATCGTCGTAAAGATTTGAACAAAATTATTCACAGGAGTAATGGATATAGTCATCGTCCTTGTCCTTGTTCGAATTCTGATACGGGGGTTTTCAGTTCGAGCAAAGAAGAATTCGATATGGAATTGGGACGCTTGTTGAGGCTGTTGCCGGAGGAGATGCGGCGGAGAGTTAACGAACATCAAGAACTTCACCAATTGATCGAGGTCGTTATGGATTTGGGTCGGAAACCCCTGGCTCGATTTCCTTCTGGGGATTTTGTCTTATCAGAACATTTGATCACAGTGGATGATCTCGAACACGCTACTTCATTGGTAGGCGATTTCGCCATTGATAATCGAGCTGGAATTAGCAGAACATTGCACCGAATCAGTGCCATTAGAAACCGCAAAGGTGCAATCATCGGGCTAACCTGTCGTGTTGGTCGAGCTATATCAGGAAGTGCCAAATTACTTCAAGATCTAGTTAAAGACGGAGCTTCTTTACTCCTTATCGGACCTCCAGGAGTTGGAAAAACTACAATTATCAGGTTTGTTATTTCACACGCTTACAGTCTTATTCTCCTTTCTTTTGTTTGA 684 43.57 MLCVPLRSISPHPKIPLGSQAKLLRFLPTTRFVHFHHRRKDLNKIIHRSNGYSHRPCPCSNSDTGVFSSSKEEFDMELGRLLRLLPEEMRRRVNEHQELHQLIEVVMDLGRKPLARFPSGDFVLSEHLITVDDLEHATSLVGDFAIDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSAKLLQDLVKDGASLLLIGPPGVGKTTIIRFVISHAYSLILLSFV 227
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03520 227 Gene3D - 177 221 IPR027417 -
Lssa7g03520 227 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 75 215 IPR027417 -
Lssa7g03520 227 PANTHER KINASE-RELATED 68 212 - GO:0009507(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03520 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr7:186102642 Lssa9g02684 Lssa-Chr9:103176629 dispersed