AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03584 ATGGAGATCGTATCAAGACAACAACACGAAAGAGAAAACCCATCTCCGACGAACTCTCCGTCCAGCCATGGCAGCAGTAGCAACAGCAATGGACATACCGCCGGCGGTGGCGCCGTCCAAACACCACCACTAACTCCAAGACCCGTTTCAAGATCCGAACCAAATTCATACCCAACAACCTTCGTCCAAGCAGACACAACTTCCTTCAAACAAGTAGTCCAGATGCTAACCGGATCATCAAAACCGACCCACCAACCAGATCCGGCGCCGACGAGGACATCCATACCGCCGATCAAAACCGGTCAACAGAAGAAACAAGGATTCAAGCTCTACGAGCGTCGGAACAGCCTGAAAAACGGGCTGATGATCAACGCATCGGTGCCGAAGCTCCATGGTCATGGGTTATCGCCGCGACTCCATGAAATGCTCTCTCCAAGCATTCTTGATTTTCCGGCGCTTGTTCTTAGTCCGGTGACGCCATTGATCGAAGACCGGTTTAATAAATCGTCACCTTCGATTGGGAACTCGTCGGAAGAAGAGAGGGTAATTGCGGCAAAAGGATTTTATTTGCATCCGTCGCCTAGGGCGGCGACGCCACATGGGACGACGGAGCCACAGCTGCTGCCTCTTTTTCCGTTGACCTCGCCGCGGGTATCGGAGTCGTCGATTTAG 672 52.68 MEIVSRQQHERENPSPTNSPSSHGSSSNSNGHTAGGGAVQTPPLTPRPVSRSEPNSYPTTFVQADTTSFKQVVQMLTGSSKPTHQPDPAPTRTSIPPIKTGQQKKQGFKLYERRNSLKNGLMINASVPKLHGHGLSPRLHEMLSPSILDFPALVLSPVTPLIEDRFNKSSPSIGNSSEEERVIAAKGFYLHPSPRAATPHGTTEPQLLPLFPLTSPRVSESSI 223
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03584 223 MobiDBLite consensus disorder prediction 10 36 - -
Lssa7g03584 223 MobiDBLite consensus disorder prediction 50 65 - -
Lssa7g03584 223 Pfam VQ motif 57 81 IPR008889 -
Lssa7g03584 223 MobiDBLite consensus disorder prediction 1 65 - -
Lssa7g03584 223 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 25 219 IPR039611 -
Lssa7g03584 223 MobiDBLite consensus disorder prediction 77 105 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03584 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr7:189632267 Lssa9g00198 Lssa-Chr9:6559172 dispersed
Lssa Lssa-Chr7:28750699 Lssa7g03584 Lssa-Chr7:189632267 wgd