Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03619 | ATGGAGGGCGTTGATGCTAACGATAAGTATGCTAAAGAATTAGAAGTAGGTGTTAGAGTTGTACAGCTTGCTTGTTGTCTATGCCAGAAGGTGCAAAAGGGTTCGATTGGTCCGACCCCTGATCAGGTCTTTTCCAAAGACGACGATTCACCTGTTACTGTCGCCGATTGGAGTGTACAAGCAATGATAAGTTGGATTCTCTCAGAATCATTCGGCAAACAAAATGTCTCAATTGTAGCTGAAGAAGACACACAAGCACTATCCGATTCAAACAGCACCAGTTTACTAGCCTCTGTGGTTGCAACCTTTAGCCATGGCACCCAGGTTCGGTCTCAAGGGTCCAACCACATCCTGGGGCCCACACAAGTTCTTGAAGCCATTAACCATTGCAATTCAACAGGTGGACCAATAGGAAAACATTGGGTCCTTGATCCTGTTGATGGAACATTAGGGTTTGTTCGTGGTGACCAGTATGCAGTGGCTCTTGCTTTGATTGAAAACGGGCAGGTTGTGGTCGGTGTTCTTGGCTGCCCAAATTATTCGAGTAAAAAAAAACTCGTGAACAATTCAAGTGTTTCAAAAGAAGGTTGTGTAATGTATGCAAGAAAAGGTAGTGGTGAAGCTTGGATGCAGCCATTGGCGTGTGAAGGTGGGACCCACGTGGTGTGGCCCAATTCGGCTACCCGAATTAGGGTTTCTTCCATTGATGATCCTTCAATGGCTACAAAGCAACCGTTGCGTGTTTATAGCATGGTGAAGTATGCAGCAATAGCGCGTGGGGATGCGGAGATATATATGAAGTTTGCAAAAGCTGGATATAAAGAGAAGATATGGGATCATGCTGCGGGGGTGGTGATAGTGGAAGAAGCTGGCGGTGTTGTGACGGATGCTGGTGGTCGGCCGCTGGATTTTTCAAGAGGGGTGTATCTTGAAGGGGTTGATCGGGGTATTGTTACTTGTTCAGGGGCGAATTTGCATGACAAAATTATTGGGGCTGTTTATGCAAGTTGGGAGTCTTCTCATTTATAA | 1029 | 45.97 | MEGVDANDKYAKELEVGVRVVQLACCLCQKVQKGSIGPTPDQVFSKDDDSPVTVADWSVQAMISWILSESFGKQNVSIVAEEDTQALSDSNSTSLLASVVATFSHGTQVRSQGSNHILGPTQVLEAINHCNSTGGPIGKHWVLDPVDGTLGFVRGDQYAVALALIENGQVVVGVLGCPNYSSKKKLVNNSSVSKEGCVMYARKGSGEAWMQPLACEGGTHVVWPNSATRIRVSSIDDPSMATKQPLRVYSMVKYAAIARGDAEIYMKFAKAGYKEKIWDHAAGVVIVEEAGGVVTDAGGRPLDFSRGVYLEGVDRGIVTCSGANLHDKIIGAVYASWESSHL | 342 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03619 | 342 | PRINTS | Inositol monophosphatase superfamily signature | 50 | 70 | IPR000760 | - | |
| Lssa7g03619 | 342 | PRINTS | Inositol monophosphatase superfamily signature | 275 | 299 | IPR000760 | - | |
| Lssa7g03619 | 342 | ProSitePatterns | Inositol monophosphatase family signature 2. | 278 | 292 | IPR020550 | GO:0046854(InterPro) | |
| Lssa7g03619 | 342 | SUPERFAMILY | Carbohydrate phosphatase | 10 | 336 | - | - | |
| Lssa7g03619 | 342 | PANTHER | PHOSPHATASE | 6 | 240 | IPR051090 | GO:0000103(PANTHER)|GO:0008441(PANTHER)|GO:0042578(PANTHER) | |
| Lssa7g03619 | 342 | ProSitePatterns | Inositol monophosphatase family signature 1. | 141 | 154 | IPR020583 | - | |
| Lssa7g03619 | 342 | Pfam | Inositol monophosphatase family | 48 | 332 | IPR000760 | - | |
| Lssa7g03619 | 342 | CDD | PAP-phosphatase | 13 | 335 | - | - | |
| Lssa7g03619 | 342 | Gene3D | - | 9 | 218 | - | - | |
| Lssa7g03619 | 342 | Gene3D | - | 224 | 336 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03619 | K01082 | 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr4:90946101 | Lssa7g03619 | Lssa-Chr7:191883444 | dispersed | |
| Lssa | Lssa-Chr4:92682503 | Lssa7g03619 | Lssa-Chr7:191883444 | dispersed | |
| Lssa | Lssa-Chr4:288201270 | Lssa7g03619 | Lssa-Chr7:191883444 | dispersed |