Gene detail

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Gene ID

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Or, Query Sequence

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Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03621	ATGGAAACCCCAGTTTCCAAGAGGCCATTGAGAAAGAAACACCTCTCTAGAAGCTATGATGAGAATTTGATGGATGATTATCTGGATAAGCAATTAGGTAATTCCCCAAGGAAAAGGTTCAGAACAAAGAAGGAATTGGAGAAAGAAACAGAAAAAGAAGCCATGATAGCCCTTTCTTTAGGGTTTCCCATTGATGCCCTTCTTGAAGAAGAAATCAAAGCCAAAGTAGTAAGCGAGTTAGATGGAAAAGAACAAAACGACTACATCGTTGTCAGAAACCATATTCTTTCAAGATGGAGAGCTAATGTACATGCATGGCTTTCCAAAGGTGAAATAAAGGAAACTGTAAGTAACGAATTCAATCACTTACTTCATTCTGCTTATGACTTTCTTCTCTTCAATGGGTATATAAATTTTGGAGTTTCACCGACTTTCAAACCTCAAATGCCCGAAGAATCAACAGAAGGATCTGTAATAGTAATCGGTGCAGGTCTTGCTGGATTAGCTGCAGCTCGCCAGTTGTTAGCTTTTGGTTTTAAAGTGATTGTGTTAGAGGGTAGGAACAGACCTGGGGGTAGAGTCTATACCCAGAAAATGGGTCAGGGGCAAAATGGTAATTATGCTGTGGTGGATCTTGGTGGAAGTGTTATCACAGGTATTCATGCAAACCCTCTTGGAGTTTTAGCTAGACAGCTATCAATTCCTCTTCATAAAGTGAGAGATAAATGTCCTTTATATGATCCAGAAGGAAAACCTGTTGGAAAAGAAACCGATTCAAAAGTAGAATTCATTTTCAATAGACTTCTAGACAAAGTAACCGAATTCAGACAAATCATGGGTGAATCATGTGGTGACATTTCATTAGGATCAGTTCTTGACAAACTCACAAAACTATACGCTGTAGCCACAAGTGTAGAAGAAAAACAATTACTCGATTGGCATTTTGCAAATCTAGAATACGCAAACGCGGGCCCCCTTTCGGATCTTTCAGCTGCTTATTGGGATCAAGATGACCCATATGAAATGGGTGGTGATCATTGCTTTTTAGCAGGTGGGAATTGGAGATTAATCGAAGCATTATGTGAAGGGGTTCCGATTTTTTATGAAAAGATTGTGAAAACCATTAGATATGGTGAAAATGGTGTTGAGGTGATTACAAGTGATCAAACATTTCAAGGTGATATTGTTCTATGCACTGTTCCTCTTGGTGTTTTGAAGAAAAAGGTGATAAGTTTTGTGCCTGAATTACCTGAAAGAAAACTTGAGGCAATTGAGAGACTTGGATTTGGGTTGTTGAACAAGGTTGCCATGGTGTTTCCTTATGTTTTTTGGGGTGAAGATGTTGATACATTTGGTTGTTTGAATAGAAATAGTGAGAATCGTGGAGAGTTTTTCTTGTTTTATAGTTATCACACAGTTTCTGGGGGATCAGTTCTTGTTGCATTAGTTGCTGGTGAAGCTGCAAAATCATTTGAATCCACACATCCTTCCACTTTGCTTCATCGTGTTTTAAATGTCCTTAAAGGAATATATGGACCAAAGGGTATTGAAGTGCCTAATCCAATCCAATCCATTTGTACAAAATGGGGAAATGATCCTCTGTCATGCGGTTCATATTCTCATGTGCGGGTCCACTCTTCCGGTAGTGACTACGATATCCTTGCGGAAAACGTTGCAAACCGCCTCTTTTTCGCCGGAGAAGCCACCAACCGCCAACACCCTGCCACCATGCATGGGGCCTACTTAAGTGGTCTAAGAGAAGCTTCATGTATTTATAGAGTCAGAAAGTCTAATTATAATAATAATAATGATGATGATAATAATAATAATAATAATAACAATAACAAACAAAATAATCCCAAAAAAAGCATTCGAAAAATCATTGGAGTGAGTGATACTCTCATAAACCTTTTCAAGAATCCCGATTTATCTTTCGGGAATTTTCTTTTTGTGTTTGACCCTTCAAATGAAGACGATGAGTCAACCGGGCTCATGATGGTTGCCATTGATAATGATGATGATGATGATAAAGTCAAAGTCAAAGTCAACAATGGTCAAAGTCAACATGCGGTGAAGCTTTACACGATGGTGACACGTGTACAGGCGCGGGATTTGGAGGCGGTGGTTGGTGGCGGGGAAAGTGGGTTGAGTTACATGTCGGAGAATCTCGGGTTGAAGTTAATGGGAATGGACTGTTTTGCCCTTGTGGCGAATTCATTGATTTCTAATATTGCTACACGGAGAAGTAGGGTTAGGAATCGGGTAGTGTTTGGAAACCGTGTTTCGTACACGTGA	2295	39.56	METPVSKRPLRKKHLSRSYDENLMDDYLDKQLGNSPRKRFRTKKELEKETEKEAMIALSLGFPIDALLEEEIKAKVVSELDGKEQNDYIVVRNHILSRWRANVHAWLSKGEIKETVSNEFNHLLHSAYDFLLFNGYINFGVSPTFKPQMPEESTEGSVIVIGAGLAGLAAARQLLAFGFKVIVLEGRNRPGGRVYTQKMGQGQNGNYAVVDLGGSVITGIHANPLGVLARQLSIPLHKVRDKCPLYDPEGKPVGKETDSKVEFIFNRLLDKVTEFRQIMGESCGDISLGSVLDKLTKLYAVATSVEEKQLLDWHFANLEYANAGPLSDLSAAYWDQDDPYEMGGDHCFLAGGNWRLIEALCEGVPIFYEKIVKTIRYGENGVEVITSDQTFQGDIVLCTVPLGVLKKKVISFVPELPERKLEAIERLGFGLLNKVAMVFPYVFWGEDVDTFGCLNRNSENRGEFFLFYSYHTVSGGSVLVALVAGEAAKSFESTHPSTLLHRVLNVLKGIYGPKGIEVPNPIQSICTKWGNDPLSCGSYSHVRVHSSGSDYDILAENVANRLFFAGEATNRQHPATMHGAYLSGLREASCIYRVRKSNYNNNNDDDNNNNNNNNNKQNNPKKSIRKIIGVSDTLINLFKNPDLSFGNFLFVFDPSNEDDESTGLMMVAIDNDDDDDKVKVKVNNGQSQHAVKLYTMVTRVQARDLEAVVGGGESGLSYMSENLGLKLMGMDCFALVANSLISNIATRRSRVRNRVVFGNRVSYT	764

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03621	764	Gene3D	-	52	152	IPR036388	-
	Lssa7g03621	764	Gene3D	-	242	547	-	-
	Lssa7g03621	764	Pfam	SWIRM domain	69	139	IPR007526	GO:0005515(InterPro)
	Lssa7g03621	764	Gene3D	-	158	589	IPR036188	-
	Lssa7g03621	764	FunFam	Lysine-specific histone demethylase 1A	52	152	-	-
	Lssa7g03621	764	SUPERFAMILY	Homeodomain-like	49	151	IPR009057	-
	Lssa7g03621	764	SUPERFAMILY	FAD-NAD(P)-binding domain	153	592	IPR036188	-
	Lssa7g03621	764	PANTHER	FLAVIN MONOAMINE OXIDASE	61	592	IPR050281	GO:0016491(PANTHER)
	Lssa7g03621	764	MobiDBLite	consensus disorder prediction	599	622	-	-
	Lssa7g03621	764	Pfam	Flavin containing amine oxidoreductase	165	591	IPR002937	GO:0016491(InterPro)
	Lssa7g03621	764	SUPERFAMILY	FAD-linked reductases, C-terminal domain	428	540	-	-
	Lssa7g03621	764	ProSiteProfiles	SWIRM domain profile.	47	148	IPR007526	GO:0005515(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03621	K11450	[histone H3]-N6,N6-dimethyl-L-lysine4 FAD-dependent demethylase [EC:1.14.99.66]

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Lssa	Lssa-Chr5:301514029	Lssa7g03621	Lssa-Chr7:191935119	dispersed
	Lssa	Lssa-Chr7:53148892	Lssa7g03621	Lssa-Chr7:191935119	dispersed
	Lssa	Lssa-Chr1:162483892	Lssa7g03621	Lssa-Chr7:191935119	transposed
	Lssa	Lssa-Chr8:28094178	Lssa7g03621	Lssa-Chr7:191935119	transposed
	Lssa	Lssa-Chr8:206707970	Lssa7g03621	Lssa-Chr7:191935119	transposed
	Lssa	Lssa-Chr8:320789259	Lssa7g03621	Lssa-Chr7:191935119	transposed
	Lssa	Lssa-Chr9:212842797	Lssa7g03621	Lssa-Chr7:191935119	transposed
	Lssa	Lssa-Chr4:218384106	Lssa7g03621	Lssa-Chr7:191935119	wgd

Transcription factors information

Select	Gene	Hmm_acc	Hmm_name	Score	E-value	Regulatory Factors	Family
	Lssa	Amino_oxidase	1.6e-90	CL0063		TR	SWI/SNF-SWI3