AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lssa7g03651 ATGGGGCGTAGCCTCTTCGCCTGCTTCTCCAAACGCTCCTCCAAAACCTCCTCTTCTGATATCAACAAGTCAACCGCAACACATGACGCCGCCGCGGACGACTTGACGGCCGATGAGTTAAAAAGAGGAGGACCGGTGGTGGTGGAGCTGTTCTCTTCCCAAGGATGCGCCACATCGCCGGAGGCGGAGCTTCTGTTCTCGAGGATAGGTAGGGGAGATTTCAATCTTGAAGTTCCGGTGATATTAATGGCGTACCATGTTGATTACTGGGATTATAACGGATGGAAGGATCCGTTTGGGTCGAGCCAGTGGACGGTGAGACAAAAGGAGTATGTAGAGTCGTTGAATCTCGACACCATGTTTACGCCGCAGGTGGTGATTCAGGGGAGGAGTCAGTGCATCGGAAACGACGAGGAGGGTCTAATCTCCGCCATCACCTCCGCAACCAGATACCCCCCGCCGGCGTTCCAGGCGACATTCGAGAGGCGTACACCGGAATCCTTGCAGGTCACCCTGAAAGGCGCGTTACGCGCCAAATTAGACGGCGGAGGAGCAGACATCATGGTGGCGCTATACGAAAGCGGGCTCGTTACCGACTGCCGGAACGGCGACAACAAGGATCGAATTCTAGCCAATGATTTCGTCGTTAGAAAGCTCGGAAAGCTCTGCTCCGGCGACAAGCTACCTCCGAAGAAGCCGATTACAGGAACACTCGATTTTGGGGTTTGGGAAGGTTTCAACAGCGCCAAATGCGGAATCGTAGTGTTTGTTCAGCAACATGGATCTCATCATATTTTTGGTTCTCAACGTATTCAACTACCAGCCAATCTCTGA 834 53.12 MGRSLFACFSKRSSKTSSSDINKSTATHDAAADDLTADELKRGGPVVVELFSSQGCATSPEAELLFSRIGRGDFNLEVPVILMAYHVDYWDYNGWKDPFGSSQWTVRQKEYVESLNLDTMFTPQVVIQGRSQCIGNDEEGLISAITSATRYPPPAFQATFERRTPESLQVTLKGALRAKLDGGGADIMVALYESGLVTDCRNGDNKDRILANDFVVRKLGKLCSGDKLPPKKPITGTLDFGVWEGFNSAKCGIVVFVQQHGSHHIFGSQRIQLPANL 277
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lssa7g03651 277 PANTHER - 1 277 IPR010634 -
Lssa7g03651 277 SUPERFAMILY Thioredoxin-like 43 273 IPR036249 -
Lssa7g03651 277 Pfam Protein of unknown function (DUF1223) 47 258 IPR010634 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lssa7g03651 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Lssa Lssa-Chr4:97292689 Lssa7g03651 Lssa-Chr7:192626682 dispersed