Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03657 | ATGCAACCCCAGAAAACCCTACCGGAATCCGACTTACCGTCGCTCGCCGCCATCAAAGTCAAGTCATCATCCCCTCGTTTCCGTCCTACCAATCATTCCGCCACCGAAACCCCCACTGCCGGCGCACAACGCAGGATAGGCATCGCTGTCGATCTTAGCGACGAGAGTGCCTTTGCTGTAAAGTGGGCCGTCCACCAGTATCTCCGCCCCGGTGACGCCGTCATCCTGATCCATGTCCGTCCTACTTCCGTCCTTTACGGCGCTGATTGGGGCTCCGTTGATCTCTCCATTGTCGACACTGACAATGAGGAATCACAGCAGAAGCTCGAAGATGATTTTGATACTTTCACCACTACGAAATCCGCTGCCCTAGCGCAACCTCTGGTCGACGCGCACATACCGTATAAGATCCATATCGTGAAAGATCATGACATGAAGGAGAGGCTTTGTTTGGAAGTTGAACGACTAGGGTTAAGTGCGGTTATCATGGGAAGCCGAGGATTCGGTGCAACAAAACGCGGAACCGATGGGAGGCTCGGGAGTGTTAGCGATTACTGTGTCCGTCACTGTGTGTGCCCGGTGGTGGTTGTGAGATATCCCGATGAGAAAGATCCCGCTGCTGCTGTTGAGCCGGTGGTGTCGGTTGCAACAGCCGATGATGAGGAAGATGACCCTGAATTCCATGATGCAACCGATGAACGAAAATTATGTTGTGTCTATTATCAGTTATTTAACTGGATCTATGTGACATAA | 753 | 51.93 | MQPQKTLPESDLPSLAAIKVKSSSPRFRPTNHSATETPTAGAQRRIGIAVDLSDESAFAVKWAVHQYLRPGDAVILIHVRPTSVLYGADWGSVDLSIVDTDNEESQQKLEDDFDTFTTTKSAALAQPLVDAHIPYKIHIVKDHDMKERLCLEVERLGLSAVIMGSRGFGATKRGTDGRLGSVSDYCVRHCVCPVVVVRYPDEKDPAAAVEPVVSVATADDEEDDPEFHDATDERKLCCVYYQLFNWIYVT | 250 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03657 | 250 | PANTHER | OS01G0783500 PROTEIN | 7 | 235 | IPR044162 | - | |
| Lssa7g03657 | 250 | Gene3D | HUPs | 32 | 210 | IPR014729 | - | |
| Lssa7g03657 | 250 | CDD | USP-Like | 45 | 197 | - | - | |
| Lssa7g03657 | 250 | MobiDBLite | consensus disorder prediction | 23 | 42 | - | - | |
| Lssa7g03657 | 250 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 44 | 203 | - | - | |
| Lssa7g03657 | 250 | PRINTS | Universal stress protein signature | 43 | 61 | IPR006015 | - | |
| Lssa7g03657 | 250 | PRINTS | Universal stress protein signature | 176 | 198 | IPR006015 | - | |
| Lssa7g03657 | 250 | Pfam | Universal stress protein family | 44 | 198 | IPR006016 | - | |
| Lssa7g03657 | 250 | MobiDBLite | consensus disorder prediction | 24 | 40 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03657 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Lssa | Lssa-Chr4:403701233 | Lssa7g03657 | Lssa-Chr7:192752593 | transposed | |
| Lssa | Lssa-Chr9:35102429 | Lssa7g03657 | Lssa-Chr7:192752593 | transposed | |
| Lssa | Lssa-Chr7:25139402 | Lssa7g03657 | Lssa-Chr7:192752593 | wgd |