Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lssa7g03675 | ATGGCGATTATACGGCAGAAGCACACACTACTTCTTCTACTACTATGTGTTATTCTTCCCTTTTCTCGATCGAAATCGGAACCGGAATCAGTAACGGAATCCTCCATTCACGATCTCCTCAAAAGCAAGGGCCTACCGGTTGGCCTGTTCCCGAAAGAAGTAGAATCCTTCACTCTTTACGACACAGGGCTCCTTGAAGTGTTCCTGAGAGGACCTTGTTTAACGAAATTCGATACCATGGCTTTCTACGAGAGCACTGTGAGAGCTAACCTTACTTACAGAAGCCTTACCGGCGTTGAAGGTCTCTCGCAGGAAGAGCTTTTCCTCTGGTTGCCGGTGAAAGATATCATCGTCGACGATCCGAAATCTGGGCTGATATTATTCGACATTGGCGTCGCTCATAAGCAGCTGTCTCTCTCACTCTTTGAAGATCCTCCTGATTGCAAATCCGAAGATTTTTTGAATTTGAAGAAGAAATCTAGAAAGGAGATAGGATTTGATGCTCAAATATAG | 513 | 44.83 | MAIIRQKHTLLLLLLCVILPFSRSKSEPESVTESSIHDLLKSKGLPVGLFPKEVESFTLYDTGLLEVFLRGPCLTKFDTMAFYESTVRANLTYRSLTGVEGLSQEELFLWLPVKDIIVDDPKSGLILFDIGVAHKQLSLSLFEDPPDCKSEDFLNLKKKSRKEIGFDAQI | 170 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lssa7g03675 | 170 | Gene3D | - | 24 | 153 | IPR036758 | - | |
| Lssa7g03675 | 170 | FunFam | Uncharacterized protein At3g07460 | 22 | 152 | - | - | |
| Lssa7g03675 | 170 | PANTHER | T31J12.3 PROTEIN-RELATED | 27 | 149 | IPR007493 | - | |
| Lssa7g03675 | 170 | SUPERFAMILY | At5g01610-like | 11 | 150 | IPR036758 | - | |
| Lssa7g03675 | 170 | Pfam | Protein of unknown function, DUF538 | 36 | 143 | IPR007493 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lssa7g03675 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 3933032 | Lssa | Lssa7g03675 | Lssa-Chr7:194824243 | Lssa9g00588 | Lssa-Chr9:17217747 | |
| 3948229 | Lssa | Lssa2g03255 | Lssa-Chr2:196352352 | Lssa7g03675 | Lssa-Chr7:194824243 | |
| 3963232 | Lssa | Lssa1g04231 | Lssa-Chr1:222447010 | Lssa7g03675 | Lssa-Chr7:194824243 |