Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lssa7g03699	ATGGAGTCGATACTCGCGAGGGCGCTGGAGTATACTCTTAAGTACTGGCTTAAATCCTTCACTAGAGATCAGTTCAAGTTACAAGGACGGACTGTTCAGCTCTCCAATTTAGATATAAACGGTGATGCGTTACACGCGAGTCTTGGATTGCCTCCGGCTTTGAATGTTACAACCGCGAAAGTCGGGAAGTTAGAAATTATACTTCCTTATTTGAGCAATGTACAAGTTGATCCTATTGTTGTGCAAATCGATAAGCTTGATTTGGTATTGGAAGAAAATGATGATTTGGATGCATATAAGAGCACAGACAGTGCACAAACACCATCCAGTCCTGCAAAAGGCAGTGGATATGGATTCGCAGACAAGATTGCAGATGGAATGACATTAGAAATAAGGACTGTCAACCTTTTACTTGAAACTCATGGAGGTGCTAGACGTCGTGGAGGGGCAACTTGGGCATCACCAATGGCATCTATTACTATCCGCAACCTCTTGCTTTATACCACAAATGAGAACTGGCAGGCTGTAAACCTTAAGGAAGCCAGAGACTTCTCAAATGACAAGAAATTCATCTACGTGTTCAAAAAGCTTGAATGGGAGCATCTATCAATCGACCTCCTGCCTCACCCTGATATGTTTGCAGCATTTTCTGAAGGTGCATTTAAAGATGATGATGGTGCAAAGCGAGTTTTTTTTGGTGGGGAGCGGTTTCTTGAAGGAATTTCTGGAGAAGCTTATATTACCATACAAAGAACAGACCTTAACAGTCCATTAGGATTGGAACTCCAACTACATATCCCTGAAGCCGTGTGCCCAGCTTTGAGTGAACCAGGACTTCGCGCTCTTCTTCGTTTTTTTACGGGATTGTATGTTTGTCTGAATAGAGGAGACGTGAATCCAAATGCTCAAGAGCGATCAGCTGAAGCTGCAGGGCGTACGCTAGTCTCCATTATGGTGGACCATATATTCTTTTGCATCAAAGATACTGATTTCCAGTTAGACCTTTTGATGCAATCACTTCTCTTTTCTCGGTCAAGCCTTTCTGATGGAGAAATCACCAAATGTTTAACGCGGGTCATGATAGGTGGACTATTTCTGCGGGATACTTCCTCTCGCCCACCATGTGCATTAGTACAACCATCAATGAATGATGCTGCAGAGGAACCACTAAGCATTCCAGATTTTGGAAAGAATTTCTGTCCTCCAATATATCCATTAGGAGATGACCAATGGAAATTAAGCGATCGTGTTCCATTAATTTCCCTCCATTGCCTCCAGTTTTTGCCCTCACCCACCCCACCTTCCTTTTCTACACAAACTGTCATTGATTGCCAGCCTCTTATGATACATCTTCAAGAGGAGTCGTGTCTAAGAATATCATCTTTACTAGCTGATGGAATCATGGTTAATTCCGGTGACATTTCACTGGATTTCTCTATCAACTCCCTTGAACTAAACATCAAAGGAATAGACATCACAATTCCACTCGAAAATCAAAAATCTAATAATCCTTCATTTGATAACTCCTTCACTGGAGCAAAACTTCATATTGAAAACCTATTTTTTCACGAGTCACCTTCCTTGCGCCTCAAGCTACTCAATCTCGACAAAGATCCTGCATGTTTCTGTCTATGGAAAGGCCAACCAATCGATGCCAGCCAGAAAAAATGGACAGGTGGCGCTTCCGTTCTTAATTTATCTCTAGAAACACGTAACAGGAATGTAATCAACGATTCCGGTCTCCAATCTTCGGAATTGACATGTGTAGAAGTGAAAGACGCTTGCATTCAGGTTGCAATGGTAACAGCAGACGGGACCCCTTTAACAGACGTCCCGCCGCCAGGTGGCGTTGTTAGAGTAGGAATCGCGTGTGAACAATATCAGTCAAACACTTCTGTTGACCAACTGTTTTTTGTATTGGATCTATACACGTATTTCGGTATAGTCAGTGAGAAGATGGCCATGGTTGGAAAAAGTAAACGGAAAAAAGCGGTGAAAAGTGATGGAAATTTAATCGAAAAAGTTCCTGGTGATACTGCTGTTAGTTTAGCTGTTAAAAACCTAAAGCTAACTTTTCTAGAATCTTCCATTCAAGAAATAATGCCCTTGGTTCAGTTTTTTGGAGAAGATCTTTTCATGGAAGTTACACATAGAACCCTCGGTGGTGCAATGGCAATTTCGTCAATTTTACGCTGGGACAAAGTCCAGGTGGACTGTGCTGAAACTTTTGAGACGAATTTAATAAATTCAAATGGTAAAGAATTTTGTCTCCCTAAATTAAGACCTGTTTTTTGGGTGCAAAAAGGAAGGAATAATCAACCGTTTTTGAATTTACGAATGGTGCATGTTATTCCATATAACGCACAAGACACAGAGTGTCATAGTGTAAGTTTATCCGCTTGTGTCGCGGGTGTACGTTTAGCCGGTGGGATGAATTACACCGAATCGCTACTCCACCGGTTTGGGATTTTAGGACCGGATGGTGGGCCGGGGGTTGGGCTTTCTGAAGGTTTGGACCGTTTGTCTGCGGGCCCATTTTCAAAACTTTTCAAACCATCATCGCATAAAAGCATAGAGGAGAAGGATAGCGGTTATTTGCAGTTGGGTACGCCTGATGACGTGGACGTATTGCTGGAATTGAAGGACTGGTTATTTGCGTTGGAGGGTGCTGACGTGGCAGAAAGTTTGTTTTTCAATAGAGAAGAGGGATCATGGCATACAACTTTCGAGAGTTTTAAAGTTAAAGCAAACAGCAGGAAAAGTCGCTTAGTAAATGGGAAGAATAACTCGAAACATCCTATTGAGTCAGTGACGGTGGGTATTTTTGTCATTATTGTAACAGTTGGTGTGGAAGGGTTAAAGACGTTGAAACCACAGCAGCAGCATAAAGGAGTTGTACCTTCAAATGGGCACAAGGAAAGGGTTGAGCCACATGGTGGGGTGGATCTTGAAGCTGACATAGTGTTATCTGAAGATGATGGTGTTAATGGGGTGATTAATTGGGTGGTGGAAAGTTTGAAATTTTCTGTGAAACATCCGGTCGAGGCAATTGTAACCAAGGATGAGTTGCAACATGTTGCTAAGTTATGCAAGTCAGAAGTTGATTCCATGGGGCGAATAACTGCTGGGGTTTTGCGTGTGTTGAAGTTAGAAGGATCGATTGGTCAGACAGCAATGGATCAACTAAGTAATCTTGGAAGTGAAGGGTTTGACAAGATCTTTTCAGCAAATAGTAATGGCTCTTCTAGTGTTGTTGGCTTGAGTCCATCTTCCTTATTGGCTTCAGATGACAAACGTAGTACATCCTTGGGTTCAACTTTAAGTTCACTTGAAGTGGCATTATTAGATACACACACCAATTGCACAGCTCTTGCTGCTAACTTAAGCACTTCTGAGTCCACCAAGCCACACCTTCACAGTGTACAAGAACTCACTCTGAAACTCGAGAGTATGCAGAAATTATTGGCCAAGTTGCAGACTCAACTCTAA	3489	42.28	MESILARALEYTLKYWLKSFTRDQFKLQGRTVQLSNLDINGDALHASLGLPPALNVTTAKVGKLEIILPYLSNVQVDPIVVQIDKLDLVLEENDDLDAYKSTDSAQTPSSPAKGSGYGFADKIADGMTLEIRTVNLLLETHGGARRRGGATWASPMASITIRNLLLYTTNENWQAVNLKEARDFSNDKKFIYVFKKLEWEHLSIDLLPHPDMFAAFSEGAFKDDDGAKRVFFGGERFLEGISGEAYITIQRTDLNSPLGLELQLHIPEAVCPALSEPGLRALLRFFTGLYVCLNRGDVNPNAQERSAEAAGRTLVSIMVDHIFFCIKDTDFQLDLLMQSLLFSRSSLSDGEITKCLTRVMIGGLFLRDTSSRPPCALVQPSMNDAAEEPLSIPDFGKNFCPPIYPLGDDQWKLSDRVPLISLHCLQFLPSPTPPSFSTQTVIDCQPLMIHLQEESCLRISSLLADGIMVNSGDISLDFSINSLELNIKGIDITIPLENQKSNNPSFDNSFTGAKLHIENLFFHESPSLRLKLLNLDKDPACFCLWKGQPIDASQKKWTGGASVLNLSLETRNRNVINDSGLQSSELTCVEVKDACIQVAMVTADGTPLTDVPPPGGVVRVGIACEQYQSNTSVDQLFFVLDLYTYFGIVSEKMAMVGKSKRKKAVKSDGNLIEKVPGDTAVSLAVKNLKLTFLESSIQEIMPLVQFFGEDLFMEVTHRTLGGAMAISSILRWDKVQVDCAETFETNLINSNGKEFCLPKLRPVFWVQKGRNNQPFLNLRMVHVIPYNAQDTECHSVSLSACVAGVRLAGGMNYTESLLHRFGILGPDGGPGVGLSEGLDRLSAGPFSKLFKPSSHKSIEEKDSGYLQLGTPDDVDVLLELKDWLFALEGADVAESLFFNREEGSWHTTFESFKVKANSRKSRLVNGKNNSKHPIESVTVGIFVIIVTVGVEGLKTLKPQQQHKGVVPSNGHKERVEPHGGVDLEADIVLSEDDGVNGVINWVVESLKFSVKHPVEAIVTKDELQHVAKLCKSEVDSMGRITAGVLRVLKLEGSIGQTAMDQLSNLGSEGFDKIFSANSNGSSSVVGLSPSSLLASDDKRSTSLGSTLSSLEVALLDTHTNCTALAANLSTSESTKPHLHSVQELTLKLESMQKLLAKLQTQL	1162

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lssa7g03699	1162	PANTHER	UNCHARACTERIZED	1	744	IPR026728	-
	Lssa7g03699	1162	Coils	Coil	1141	1161	-	-
	Lssa7g03699	1162	Pfam	VPS13-like, N-terminal	1	102	IPR026854	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lssa7g03699	-	-

Event-related genes

Select	Gene_1	Gene_2	Event_name
	127175	Lssa5g00179	Lssa7g03699

Duplication type information

Select	Gene1	Location1	Gene2	Location2	E-value	Duplicated-type
	3967517	Lssa	Lssa5g00179	Lssa-Chr5:10319856	Lssa7g03699	Lssa-Chr7:195780187